LOCUS       XM_039106517            1076 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 40S ribosomal protein S25
            (LOC691532), mRNA.
ACCESSION   XM_039106517
VERSION     XM_039106517.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1076
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1076
                     /gene="LOC691532"
                     /note="similar to 40S ribosomal protein S25; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 long SRA reads, 4 Proteins, and 98% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:691532"
                     /db_xref="RGD:1582782"
     CDS             358..741
                     /gene="LOC691532"
                     /codon_start=1
                     /product="40S ribosomal protein S25-like"
                     /protein_id="XP_038962445.1"
                     /db_xref="GeneID:691532"
                     /db_xref="RGD:1582782"
                     /translation="MPPKDNKKKKKKDAGKSAKKDKDPVNKSGGKAKKKKWSKGKVRD
                     KLNNLVLFDKATYDKLCKEVPNYKLITPAVVSERLKIRGSLARAALQELLSKGLIKLV
                     SKHRAQVIYTRDTKGGDAPAAGEDA"
ORIGIN      
        1 gagctgggga ccgaacccag ggccttgctc ttgccaggca agcgctctac cactgagcta
       61 aatccccagc cccttttctt tccttttctt ccttccttcc tttcttcctt tcttccttcc
      121 ttcctttgtt ttgttatggt ttttcaagat agggtttttc tgtgtagctc agactgtctt
      181 ggaactcact ctgtagacta ggctggcctc aaactcacgg aagtctgcct tcctttgccc
      241 cctgagctga caaagcatag attgttggca cacagattct aagaatggga agaagatcgt
      301 ttaagaaatc ttgatccagt gtggctgcag tggtccacat actctctgag cttcgccatg
      361 ccgcccaaag acaacaagaa gaagaagaag aaggatgctg gaaagtcggc caaaaaagac
      421 aaagacccag taaataaatc tggtggcaag gcaaaaaaga agaagtggtc caaaggcaaa
      481 gttcgggaca agctgaacaa tctcgtcctg tttgacaaag ctacttacga taaactttgt
      541 aaggaagttc ccaactataa gcttattact ccagctgtgg tctctgagag actgaagatt
      601 cgaggttcct tggccagggc agcccttcag gagctactta gtaaaggact tatcaagctg
      661 gtttcaaagc acagagccca agtaatttac accagagaca caaagggtgg agatgcccca
      721 gctgctggtg aagatgcata aacagattca agcatttggg aaaataaaac tttattgaat
      781 caaaaaaaaa aatcttgatc caagttcatc acacattttg tcccttgtta tacagatgtt
      841 ttccacatta cacagtttta cagaattgtg atcataatgc cacactccct gtgttctctt
      901 cataattata gtgtgcattg tatcacaaca ctctgatcag ctgaagtaaa tgcactttat
      961 tctgctgttg aaggacttac acattgtttc caaaattgaa gttataaatc atgtgcctct
     1021 ttcacacaca tggtggcagt ataataaagg catatactga gggtaaaaag aaaaaa
//
