LOCUS       NM_001109633             973 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus BPI fold containing family B, member 9A
            (Bpifb9a), mRNA.
ACCESSION   NM_001109633 XM_001077515
VERSION     NM_001109633.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000010.1.
            
            On Mar 31, 2023 this sequence version replaced NM_001109633.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643288.40856.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN06680412,
                                           SAMN06680414 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on manual assertion, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-82                JAXUCZ010000010.1  43096246-43096327
            83-172              JAXUCZ010000010.1  43096821-43096910
            173-283             JAXUCZ010000010.1  43097327-43097437
            284-436             JAXUCZ010000010.1  43097854-43098006
            437-568             JAXUCZ010000010.1  43098941-43099072
            569-973             JAXUCZ010000010.1  43100801-43101205
FEATURES             Location/Qualifiers
     source          1..973
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q22"
     gene            1..973
                     /gene="Bpifb9a"
                     /note="BPI fold containing family B, member 9A"
                     /db_xref="GeneID:691277"
                     /db_xref="RGD:1586234"
     exon            1..82
                     /gene="Bpifb9a"
                     /inference="alignment:Splign:2.1.0"
     exon            83..172
                     /gene="Bpifb9a"
                     /inference="alignment:Splign:2.1.0"
     CDS             100..807
                     /gene="Bpifb9a"
                     /codon_start=1
                     /product="Protein RoBo-1-like precursor"
                     /protein_id="NP_001103103.1"
                     /db_xref="GeneID:691277"
                     /db_xref="RGD:1586234"
                     /translation="MLWSSVSKSFLAVCVITEFAAIFVESFTCGKSICTNGLCQNFSA
                     CETSKSCFSQTQELKVPQPSTSLIVHQKGCSLDECTGLAFSATLGDQQTFRYDQQCCS
                     SNMCNQLDTQPSQVPAKANGVQCLAWYMEAGMPRIPTLLKCTGSETKCVSFMGTAVGS
                     SSLLSLVVIGMGCATESACNLNMTVFDSVNIRTFCSGGLPVFSTTSSSPNRTGLRPAF
                     ISTVPVLISLLLLKVLL"
     exon            173..283
                     /gene="Bpifb9a"
                     /inference="alignment:Splign:2.1.0"
     exon            284..436
                     /gene="Bpifb9a"
                     /inference="alignment:Splign:2.1.0"
     exon            437..568
                     /gene="Bpifb9a"
                     /inference="alignment:Splign:2.1.0"
     exon            569..973
                     /gene="Bpifb9a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctcctttca ccctttctct aggtgagatc gcttcctctc cagctcccag cagtcctttc
       61 agaagagcag gagtccttct tgggttcttg ggagtcatca tgctctggtc ctcagtctcg
      121 aagagcttcc ttgctgtctg tgttatcacc gagtttgctg cgatctttgt ggagagtttc
      181 acttgcggaa agtctatatg cacaaatgga ctctgtcaga acttcagtgc atgtgaaact
      241 tcgaaaagct gcttcagcca aacacaggaa cttaaagtgc cacagccatc cacaagccta
      301 attgtccacc agaaaggctg ttctctagat gaatgtactg gactggcatt ctcggcgaca
      361 ttgggggacc aacagacatt tagatatgac cagcaatgct gtagtagtaa tatgtgcaac
      421 caattggaca cgcaaccatc tcaggtgcct gcaaaagcca atggtgtcca gtgtcttgcc
      481 tggtatatgg aggcaggcat gccacgtatt ccaactctcc taaagtgcac agggagcgag
      541 acgaagtgcg tttcatttat gggcacagct gttggaagca gtagtctcct ttcgttagtg
      601 gtgattggaa tgggctgtgc gacagaaagt gcctgcaacc tgaatatgac cgtttttgac
      661 agcgtaaata tccgtacctt ctgctccggt gggttacctg tattttcaac cacctcgtca
      721 tctccgaata ggacgggcct tcgacctgca ttcatctcaa cagtaccagt tctcattagt
      781 ctcctcttgc tgaaagtctt gctttgatct tccaggctca ggccatctca cagtctctct
      841 ctcacacaca cacacacaca cacacacaca cacacacaca cacacacaca cacttggagg
      901 gcttccttta gtgagaattc aatgttggtg agtgcttgat gtttttgtac ttcagcatta
      961 aaaactccaa tcc
//
