LOCUS       XM_001077182            1227 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to arylacetamide deacetylase
            (LOC691196), transcript variant X1, mRNA.
ACCESSION   XM_001077182
VERSION     XM_001077182.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_001077182.5.
            
            On Jan 21, 2021 this sequence version replaced XM_001077182.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1227
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1227
                     /gene="LOC691196"
                     /note="similar to arylacetamide deacetylase; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins, and 52% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:691196"
                     /db_xref="RGD:1587396"
     CDS             1..1227
                     /gene="LOC691196"
                     /codon_start=1
                     /product="arylacetamide deacetylase-like 4 isoform X1"
                     /protein_id="XP_001077182.1"
                     /db_xref="GeneID:691196"
                     /db_xref="RGD:1587396"
                     /translation="MAVLWLVLLGGMLTFFLGVFVWAFIQHLLTVEIPSTLKHPVKLR
                     ILHFSFQYLINLGTILEKLRICSTPAFLLCIQDLVIIIKKDPNMLVTDTRFGTVPVRL
                     FKPKKVSSKLRRGIIFYHGGGGLFGSLDVYHGLGNFLARETDSVVLLVGYRKLPDHRH
                     PVIHLDCLNASIHFLKNLQTYGVDPSRVVIAGESAGGWAVATVTQALSCQDKLPQIRA
                     QVLITPVLQGVNFQLPSQLQKHNVPLLTRDLMITFICSYLSIDLSWKNAILTGACVPP
                     DMWKKYSKWLSSDNIPQRFKGKDFSPEFLGPFNETAYLETKHILDEKISPLLADDKII
                     AQLPDTFLLSCEHDILRDDTLLYKKRLEDQGVPVTWHHVEDGFHGCIIFFDNQFFSFP
                     CSMNALNATISYIKGI"
ORIGIN      
        1 atggctgttt tgtggctggt gctgctagga ggaatgctca cattcttcct gggagtcttt
       61 gtatgggctt tcatccagca ccttctcact gttgaaattc catctaccct gaagcatcca
      121 gtcaagttaa gaattttgca tttcagtttc cagtacctga taaatttggg aaccatacta
      181 gagaaactga gaatttgttc cacgcctgca tttttactgt gtatccaaga cctagtaata
      241 ataataaaga aggatcctaa tatgttagtg actgacacgc gttttgggac agtgcctgtg
      301 aggctgttca agcccaaaaa agtgtcttca aaactccggc gaggcatcat attctaccat
      361 ggaggaggtg gattatttgg cagtctggat gtttaccatg gcctaggcaa ctttctcgcc
      421 cgtgagacag actcagtggt cctgttggtg gggtaccgta agcttccgga ccaccgtcat
      481 cctgttattc accttgattg cctgaatgct tccattcact tcctgaagaa ccttcaaacc
      541 tatggggtag acccttcccg tgtggttatc gctggagaga gtgctggagg ttgggctgtg
      601 gccactgtca ctcaggcttt gtcctgtcaa gacaagcttc cccagatcag ggctcaagtc
      661 ctgattactc cagttttaca aggcgttaac ttccagttac catcacaatt gcagaaacac
      721 aatgttccat tgcttacgag agacttaatg attacattta tttgtagcta cctaagcatt
      781 gatctctctt ggaaaaatgc catactgaca ggagcttgtg tgcccccaga catgtggaaa
      841 aagtacagca agtggcttag ctctgacaac attccccaaa ggtttaaggg caaagacttt
      901 agtcctgagt ttctaggacc tttcaatgag actgcctatc tggaaactaa gcatattttg
      961 gatgaaaaaa tttcacctct cctagcagat gacaagatca ttgctcaact tccagacaca
     1021 tttctattga gctgtgagca tgatatcctc cgggatgata ccttactcta caagaagcgc
     1081 ttggaagacc agggggtccc tgtgacctgg caccatgtgg aagatggctt tcatggatgt
     1141 ataatttttt ttgataacca gtttttctct tttccctgct ccatgaatgc tttaaatgct
     1201 accatcagtt atattaaggg tatatga
//
