LOCUS       XM_008759083            3050 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to zinc finger protein 418
            (LOC691135), transcript variant X1, mRNA.
ACCESSION   XM_008759083
VERSION     XM_008759083.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008759083.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008759083.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3050
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3050
                     /gene="LOC691135"
                     /note="similar to zinc finger protein 418; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 ESTs, 14 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     178 samples with support for all annotated introns"
                     /db_xref="GeneID:691135"
                     /db_xref="RGD:1587451"
     CDS             113..2905
                     /gene="LOC691135"
                     /codon_start=1
                     /product="zinc finger protein 271-like isoform X1"
                     /protein_id="XP_008757305.3"
                     /db_xref="GeneID:691135"
                     /db_xref="RGD:1587451"
                     /translation="MKAKKTVGSSGSCVRAPALSTEPMAAVKHLAQIPRCTEAGMICT
                     QGCVTIEDVTVYFSQEEWKLLDEAQRLLYLDVMLENFTLISSLVYRYKAEAEEKTCAR
                     SLSQTEAPQVRTPKQGQLRQKPHPSDICITVLKDILHLNDLPGQKPYLTEVCTKPQDH
                     KHHRAKNWLKRDVDSLVKSCIFHVAENPFICSKIGEKFPAIWNLLQPKDIPNGEKQNK
                     IKRGKAFHSDKNNSESDEYKKSSSPQHRLHEYPGVCSTKGGFESNSCEQDLNKYSPAP
                     FRMDQTVNRPYECHVCGKWFGQKATLRIHQRRHTGEKPYKCGECGKSFCQISKLSEHC
                     RVHSGERPFECLKCGKAFVCHSSLLRHQRTHTGEWPYECSDCGRLFRQIVSLITHQRT
                     HTTEKPYKCGQCEKSFSHKATLTVHQRVHTGEKPYHYEACGKSFSQSSGLNNHSKIHT
                     GEKPYECGECGLCFRQRATLMKHLRTHTSERPYECRECGKFFKQYFYLIKHRRIHTTT
                     EFYEYEQCVKSYTQKATLIRHQRVHTGESPYKCEECGKAFEYKSRLNRHQRTHTGERP
                     YECAKCGKFFRERYDLAEHQKIHTKAKPYHCDQCGKCFSRGADLVKHQRVHTGERPYT
                     CGECGKTFRRSTHLVQHRRIHTGEKPYHCEACGKSFSQSSGLINHSKIHTGEKPYKCG
                     ECGLCFRQRATLMKHLRTHTSERPYECRECGKFFKQYFYLIEHRRIHTTNEFYECEQF
                     GKSYTQKTTLIRHQRVHTGESPYKCEECGKAYEYKSRLNRHQRTHTGERPYECAKCGK
                     FFRERYDLAEHQKIHTKEKPYHCDQCGKCFSRGADLVIHQRVHTDERPYTCGECGKTF
                     RRSTHLVQHRRIHTGEKPYHCEACGKSFSQSSGLINHSKIHTGEKPYKCGECGLCFRQ
                     RATLMKHLRTHTSERP"
ORIGIN      
        1 cttcctgcat tgcgtcctgt ctttggttta acttcccatg ggttggtatt tggaggattc
       61 tgagctttag gatcgccaaa ttatactcaa gttaagagag agccggcgca ggatgaaggc
      121 caagaagacc gtaggcagca gcggtagctg tgtccgggcc cctgcgttgt caacagagcc
      181 gatggcggct gtgaagcacc tggctcagat tcccagatgt acagaagcgg gtatgatctg
      241 tacacagggc tgtgtaacca ttgaggacgt gactgtttac ttctcccagg aagagtggaa
      301 gctcctggat gaagctcaga ggctactgta tcttgatgtg atgctggaga attttaccct
      361 tatatcctca ctggtttatc ggtataaagc agaggctgaa gaaaaaacct gtgcacggag
      421 tctttcacaa actgaagcac cacaagtcag gactccgaag caaggtcaac tcaggcagaa
      481 gcctcatccc tctgacatct gtatcaccgt cctgaaagat atcttgcatc tgaacgatct
      541 acctgggcaa aagccatatt tgacagaagt gtgtacaaag ccccaggacc ataagcatca
      601 cagagccaag aattggttaa agagagacgt ggactccctt gtgaagagct gtatattcca
      661 tgtggcagag aaccctttca tctgtagtaa gattggagag aaattcccag ctatatggaa
      721 tcttctccaa cccaaggaca tccccaacgg tgagaaacaa aataaaatta agcgtggaaa
      781 ggcttttcac agtgataaaa ataattctga atcagatgaa tataagaaat cttccagccc
      841 ccaacacagg cttcatgaat acccaggagt ttgcagtaca aaggggggtt ttgaatctaa
      901 cagttgtgag caagacttaa acaagtactc acctgcacca ttccggatgg accagactgt
      961 aaaccgacca tatgagtgtc atgtctgtgg aaaatggttt ggccagaaag ccacacttag
     1021 aatacaccag agacgtcata ccggagaaaa accatataag tgtggtgaat gtggaaagtc
     1081 tttttgtcaa atctctaaac taagtgaaca ctgcagagtt catagtggag aaagaccttt
     1141 tgagtgtctg aaatgtggga aagcctttgt gtgccattct agtcttctgc ggcaccagag
     1201 aacacacact ggagaatggc cgtatgaatg cagtgactgt gggagactgt ttagacagat
     1261 tgtcagcttg attacacacc agagaactca cactaccgag aaaccttata aatgtgggca
     1321 gtgtgagaag tcttttagtc acaaagccac tcttactgta catcagagag ttcacactgg
     1381 ggaaaagccc tatcactatg aagcatgtgg gaaatccttc agccaaagtt ccggtcttaa
     1441 taatcactcc aaaattcaca ctggagaaaa gccttatgag tgtggagaat gcggtctatg
     1501 ctttcgccag agagctaccc tcatgaaaca cctgagaacc cacacttcag aaaggcctta
     1561 tgaatgtaga gaatgtggta agttttttaa acaatatttc tacctcatta aacaccgtag
     1621 gattcacacc acaacagaat tttacgaata tgaacagtgc gtaaagtctt atacccaaaa
     1681 agccaccctt ataagacacc agcgagtcca cacaggggag agtccttata agtgtgagga
     1741 gtgtggaaaa gcctttgaat acaaatccag acttaatcga catcaaagaa cgcatactgg
     1801 tgaaaggcct tatgaatgtg ccaaatgtgg gaaattcttc agagaaaggt atgatcttgc
     1861 tgaacaccag aaaattcaca ctaaagcaaa gccttaccat tgtgatcagt gtgggaagtg
     1921 ttttagccgg ggagctgact tggttaaaca ccagagagtt cacactggtg aaagacctta
     1981 tacttgtggt gaatgtggga agaccttccg ccgatctacc caccttgttc aacacagaag
     2041 aattcacact ggggaaaagc cctatcactg tgaagcatgt gggaaatcct tcagccaaag
     2101 ttccggtctt attaatcact ccaaaattca cactggagaa aagccttata agtgtggaga
     2161 atgcggtcta tgctttcgcc agagagctac cctcatgaaa cacctgagaa cccacacttc
     2221 agaaaggcct tatgaatgta gagaatgtgg taagttcttt aaacaatact tctacctcat
     2281 tgaacaccgt aggattcaca ccacaaatga attttacgag tgtgaacagt tcgggaagtc
     2341 ttatacccaa aaaaccaccc ttatcagaca ccagcgagtc cacacagggg agagtcctta
     2401 taaatgtgag gagtgtggaa aagcctatga atacaaatcc agacttaatc gacatcaaag
     2461 aacgcacact ggtgaaaggc cttatgaatg tgccaaatgt gggaaattct tcagagaaag
     2521 gtatgatctt gctgaacacc agaaaattca cactaaagaa aaaccttacc attgtgatca
     2581 gtgtgggaag tgttttagcc ggggagctga cttggttata caccagagag ttcacactga
     2641 tgaaaggcct tatacttgtg gtgaatgtgg gaagaccttc cgccgatcta cccaccttgt
     2701 tcaacacaga agaattcaca ctggggaaaa gccctatcac tgtgaagcat gtgggaaatc
     2761 cttcagccaa agttccggtc ttattaatca ctccaaaatt cacactggag aaaagcctta
     2821 taagtgtgga gaatgcggtc tatgctttcg ccagagagct accctcatga aacacctgag
     2881 aacccacact tcagaaaggc cctgaatgta gagaatgtgg taagtttttt aaacaatatt
     2941 tctacctcat taaacaccgt aggattcaca ccacaacaga attttacgaa tatgaacagt
     3001 gcgtaaagtc ttatacccaa aaagccaccc ttataagaca ccagcgagtc
//
