LOCUS       XM_039103700            3924 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to GTPase activating protein
            testicular GAP1 (LOC691033), transcript variant X2, mRNA.
ACCESSION   XM_039103700
VERSION     XM_039103700.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3924
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3924
                     /gene="LOC691033"
                     /note="similar to GTPase activating protein testicular
                     GAP1; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 ESTs, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:691033"
                     /db_xref="RGD:1588660"
     CDS             215..2641
                     /gene="LOC691033"
                     /codon_start=1
                     /product="rho GTPase-activating protein 20-like isoform
                     X1"
                     /protein_id="XP_038959628.1"
                     /db_xref="GeneID:691033"
                     /db_xref="RGD:1588660"
                     /translation="MEMIEEDVGEENRAVVCQGAVVLRRGWKRNKRYLTLFTDVLVIS
                     SKLNKKKFKVKHVIPLTYLWLGNEVDIFRTDNSPASKSIYLYWPMGNAVVTFCSMEET
                     IWWYFFLQRSIRDAKKQNKTDLSLQISTEDIAYCDTPLYVTATNFDTVNDIISKLLPM
                     MRKHSIEDYQLWFCSRPGEAPRVLQGNDYPHDIIMINIQKNFTSRDLRNFTAFPSLPG
                     LIMKYLNADAQGQFILRPRNSARSQKNMKEKTLKKQRTSTSSWWHSISVPHPDQICTT
                     QNLNNGGKLFGRELGSICQDGNLPSAILDMLSLLKREGPTTEGVFLLRPSITLCQTIK
                     DKLDSEEEVDMNKQSVHVVSWIFKDFLKKIEGSLMTSKLYDEWIAVTKKVDEEEKLAA
                     VQSLLDKLPPANAALLRQFFQILYEIKSNSPVTEMSSYHLSVGIAPCLLFMPSSCNNG
                     RTKDIAKKISLVTFMIENCPKIFGEDVVAVPYETSLSHPPGAKSSCSLNTAANIRNVK
                     KTERGLSRCPAGRTCTPGYHARPGSPAAPLPCEGPLGSGKHERKVHTIPSVVSPNRLR
                     STKKSLFGQPLTSIFEDNKLPTPIIDMMSIIAEKGQSSDHLFKTMSENSHCSLRDKID
                     TELCIKWNEECVLVVASVLKDFISNIDGSLLTSNLYENWLTIPDEGTLAGKISAIQSL
                     LQQIPEPNFILLKYLICLLVIIKDSPMNKLDTKRLSIRLAPHVLWGWTSSNSLFGKVV
                     SRKISLMQIMIDNYIQIFENDNKYCIHIDKRSDGLKISADFINSSGKSTAMDEIIGGH
                     NRKACGNDKI"
ORIGIN      
        1 agatggcatg agccatagaa tattgacatc acaatggttc ttcagcctga caactacaga
       61 atcctcagac tacagttgct ttctagccac tgcagtcacc ggtttggtgt ttagaggcag
      121 agaggcgaag gaaaattcac attgttcgat gaattcttca ttgcaggctc atctaaaaag
      181 gtggagttct gtatgaggag catttttttc caacatggaa atgattgagg aagatgtggg
      241 agaagaaaat cgagccgtag tttgccaagg ggccgtggtt ctccgaagag gctggaaaag
      301 aaataaacga tatctcaccc tcttcactga tgttttggtt atatccagta aactgaataa
      361 gaagaagttt aaagtaaagc atgtcattcc attgacttac ctgtggcttg gtaatgaagt
      421 ggacatattc aggacagaca acagccctgc ttccaagtcc atttacctgt attggcctat
      481 gggaaatgct gttgtcacct tttgttccat ggaagagacc atttggtggt acttctttct
      541 acaaagatcc attcgtgatg cgaagaagca gaacaaaaca gatctatccc tgcagatatc
      601 cactgaggac attgcatact gtgacactcc tctatatgta acagcaacaa acttcgatac
      661 agtcaatgac ataatcagca agttactgcc aatgatgaga aaacatagca ttgaagatta
      721 tcaactgtgg ttctgttctc gccctgggga agctccaaga gtactccaag gaaatgatta
      781 tccacatgac attataatga taaatattca aaagaacttc acttcacggg acttaagaaa
      841 ctttactgct ttcccttccc tacctgggct gatcatgaaa tatctaaacg ctgatgcaca
      901 ggggcaattc atcttaaggc ccagaaactc agccagaagc caaaaaaata tgaaggaaaa
      961 gactcttaag aaacaaagaa cttctacatc atcgtggtgg cacagcatct ctgtgcccca
     1021 cccagaccaa atatgcacca cccaaaatct taacaatgga ggaaaactgt ttggaagaga
     1081 actcggttcc atttgtcagg atggcaacct gccgtcggca attctggaca tgctgtccct
     1141 actaaaaagg gaagggccca caacggaggg tgtctttcta ttacgtccga gtataacatt
     1201 gtgccaaaca ataaaagaca aattggattc agaagaagag gtggacatga acaagcaatc
     1261 agtgcacgta gtttcgtgga tctttaagga cttcctaaaa aagatcgaag gaagtctgat
     1321 gacctcaaaa ctgtatgatg agtggattgc tgtaacgaaa aaagttgatg aggaagagaa
     1381 attagctgca gtgcagagtc ttttagataa actgccacct gcaaatgctg cgcttctgag
     1441 gcaatttttt caaatattat atgaaattaa aagtaattct cctgttactg aaatgtcttc
     1501 ttaccatcta tctgttggga tagccccatg cctcttattc atgcccagct cctgcaataa
     1561 tggaaggaca aaagacattg ccaaaaagat ttctctggta acatttatga tcgaaaactg
     1621 tccaaaaatt tttggagagg atgtggttgc agtgccgtat gaaacttccc tatctcatcc
     1681 tcccggagca aagtcctcat gttccctgaa cactgcagca aatatcagaa acgtgaagaa
     1741 aaccgaacgt ggactgagca gatgccccgc tgggaggaca tgcactcctg gctaccatgc
     1801 acggccagga agtccagctg cccctcttcc ctgtgaaggc cctctaggtt cagggaaaca
     1861 tgaacgcaaa gtccatacca ttccatcagt agtgtctcca aatcgactgc gatctacgaa
     1921 gaaaagtttg ttcggccaac ctcttacgag tatttttgaa gacaataagc tgcctacccc
     1981 aataattgat atgatgtcta taattgcaga aaaaggacaa agttctgatc atttattcaa
     2041 aactatgtct gaaaattcac actgttccct gagggacaag attgacacag aactatgtat
     2101 taaatggaat gaagaatgtg tgttggttgt agcttcagtc ttaaaggact ttatttcaaa
     2161 tatagatgga agcctcctga cttccaattt atatgaaaat tggcttacca tcccagatga
     2221 aggaactctg gctggaaaaa ttagtgccat tcaaagcctt ctacaacaga tcccagaacc
     2281 aaactttata ctactgaaat atctcatttg tctattagtg ataataaaag actcacccat
     2341 gaataagcta gatactaaaa ggttatcgat ccgccttgct ccgcatgtcc tatggggttg
     2401 gacttctagc aactcattat ttgggaaagt tgtctcaaga aagatatctc ttatgcaaat
     2461 tatgattgac aattatattc aaatatttga aaatgataat aaatattgca tccacattga
     2521 caaaaggtct gatggattaa agatatctgc agatttcata aattcttctg gcaaatcaac
     2581 tgctatggat gaaatcatag gtggacacaa taggaaagcc tgtggcaatg ataaaattta
     2641 aatattttgt atgttgctct acaggcatgg tccttcaggt atgaaaagat ttatttagac
     2701 atcaagggaa tggaaggaca atatcattct gtgatttcat atatttgtaa atctcaaagg
     2761 agcaaagagg tcacaaaatt atattagaat acgggaaatg ttttgaacaa aaatttcatt
     2821 aaattatgct taaatatatg ttatatattt atatacacat ttacttatgt gcatctatat
     2881 acatacagtt atgtatgata aactatttac cctataagaa tcccacaata ttgacttttt
     2941 tcccatgttc cataattcat aggatatatc attcatatga aaatgttatt ttggatgaaa
     3001 tcatgtagaa atatttattt gattcatgta tccattaaaa cattctgcat gtttaagccc
     3061 tgtaccactg tcaacatgct tagctatcct actgtaaaag taataatttt tttaaattcc
     3121 tatgagagac aatcttgcca aatttttagc aatggtataa atattaaatt gaagaggatc
     3181 cacttaaaaa gatatgtgaa gaatgataga ggctaaaaca ctcgtgatca ttagttagtg
     3241 acactcaaat tcatatccat tgataactca agtaattctt tgtatagatt taagaaaaca
     3301 tattgaaata ttactctttt attttaattg tgcttcatat ttttaattat actattttta
     3361 atgctacaat ccaaataaca attcaaaata ttcattactt aaagtgtaca aagggatgtc
     3421 ttgcaaagtt ttttaaaatt ttttattaga tatatttctt tacttacatt acaaatgtca
     3481 tgccccttcg ctatttcctg tacataatcc cccaagccct cccctaaccc tcccccatac
     3541 aggtattccc cctacacatt catctttctg tcaaccccat attcacctgc actggggtca
     3601 aaccttgaca gcaccaagca cttcccttcc actggtgacc caataaggct cttctctgct
     3661 acatatacag ttggagccct gagtcagtcc atgtatagtc tttcgggggt tgtttagtcc
     3721 ctgaaagcat gcttggttgg caaagttgtt tttatggtgt tgcaagcact ctcaattctt
     3781 tctatactcc ctctaattcc acccaagggg gtcctgttct cagttcagtg gtttactgca
     3841 aacattgacc tcggtattgg acatgctctg gatatgtctc tcagaagaga tctgtatcca
     3901 gtccttttct gcatgcattt tttt
//
