LOCUS       XM_039106698            1157 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38
            (LOC690597), mRNA.
ACCESSION   XM_039106698
VERSION     XM_039106698.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106698.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1157
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1157
                     /gene="LOC690597"
                     /note="similar to 60S ribosomal protein L38; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:690597"
                     /db_xref="RGD:1594668"
     CDS             460..648
                     /gene="LOC690597"
                     /codon_start=1
                     /product="60S ribosomal protein L38-like"
                     /protein_id="XP_038962626.1"
                     /db_xref="GeneID:690597"
                     /db_xref="RGD:1594668"
                     /translation="MPWKTEEIKDILLSAQGKDTKSVEIKKNKDNVKLEVCCSRYHYS
                     LVVTDKEKAEKQRSPPPG"
ORIGIN      
        1 tgtaggacaa aaatctcaga ggatctcctc cacggatgtc aactgtctca accatcatac
       61 aggaatgaag cttgcaaact tctttggaga aaagaggttt ctggagaaaa cagaggcaag
      121 aaaacttaag aaattctgga ctgtataaac tagatccaag gctgtatgta attttaaaca
      181 tgtcacacaa atgtgcacac aaacacacac acacaccaaa accaagagat ttctgtactt
      241 aagatacagt ctaacactaa caaaactgtt tttttaaaaa aaagtcttat ttcttgatcc
      301 gtctgctatt tctcccacat acatgccaat taaatagtac tttgaacacc aaggctcaca
      361 gttgaggtgt tatacacttc tgcgactcta aagttcacaa tgtgcttttt ccgttctctc
      421 tggttctcac ccctgtgctg acaccagaga aagcgcacca tgccttggaa aactgaagaa
      481 atcaaggaca ttctgctttc agcccagggg aaggacacca aatctgtcga gatcaagaag
      541 aacaaggata atgtgaagtt ggaggtttgc tgtagcaggt accattacag cctggttgtc
      601 acagacaagg agaaggcaga gaagcagcgg tctccacccc caggatgaac agtgaagcag
      661 ctgaagtgaa ccagacctct gcatgtgact attgagaagt caaaataaaa agcttacaat
      721 atgggactag gggtataact gttagaacac tagtctagga agcataaggc ctgggggcct
      781 cagcccttag aaaaataaga taaaaacaaa aattataaca tgagcaggac ctacacctgt
      841 ggtcacagct ggaatcttgg gtgtgccctg tgcctggcct cactgggggc ttttgtttgt
      901 tttccttgct catttgttga ggaaggatct taaccctggc taactgtaac ttatatacaa
      961 ccaatgctag ccttgaatta atggtgaggc tccagcctca gtttcccaag ttctggcatt
     1021 gcaagctgtc cagatgtcat attatgccct ttttaaaatg tttatctttt tattatattt
     1081 catgtgtttg tttagtgtat gtatatgtgt gtgtgtgcat acacacacgt gcgaatgcac
     1141 tcgcatcacc tgtatga
//
