LOCUS       XM_039106689             740 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to High mobility group protein
            1 (HMG-1) (High mobility group protein B1) (Amphoterin)
            (Heparin-binding protein p30) (LOC690521), mRNA.
ACCESSION   XM_039106689
VERSION     XM_039106689.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..740
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..740
                     /gene="LOC690521"
                     /note="similar to High mobility group protein 1 (HMG-1)
                     (High mobility group protein B1) (Amphoterin)
                     (Heparin-binding protein p30); Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 24
                     Proteins, and 76% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:690521"
                     /db_xref="RGD:1594733"
     CDS             99..740
                     /gene="LOC690521"
                     /codon_start=1
                     /product="high mobility group protein B1-like"
                     /protein_id="XP_038962617.1"
                     /db_xref="GeneID:690521"
                     /db_xref="RGD:1594733"
                     /translation="MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKK
                     CSERWKAMSAKEKGKFEDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAF
                     LFCSEYRPKIKGEHPALSIGDVTKKLGEVWTNTASDDKQPCEKMAAKLKEKYEKDTAA
                     YRAKGKPDAAKKGVVKAERSKKKKEEEDDEEDEDDEEEEEEEDEDDEEDDDDE"
ORIGIN      
        1 ttgcagtaca ttgagctcca tagagacagc gccggggcaa gcgagagccg gacgggcact
       61 gggcaactct gtgcctcgcg gaggaaaatc aactaaacat gggcaaagga gatcctaaga
      121 agccgagagg caaaatgtcc tcatatgcat tctttgtgca aacctgccgg gaggagcaca
      181 agaagaagca cccggatgct tctgtcaact tctcagagtt ctccaagaag tgctcagaga
      241 ggtggaaggc catgtctgct aaagaaaagg gaaaatttga agatatggca aaggctgaca
      301 aggctcgtta tgaaagagaa atgaaaacct acatcccccc caaaggggag accaaaaaga
      361 agttcaagga ccccaatgcc cccaagaggc ctccttcggc cttcttgttc tgttctgagt
      421 accgcccaaa aatcaaaggc gagcatcctg ccttatccat tggtgatgtt acaaagaaac
      481 taggagaggt gtggaccaac actgcctcgg atgacaagca gccctgtgag aagatggccg
      541 ccaagctgaa ggagaagtac gagaaggata cagctgccta cagagctaaa ggaaaacctg
      601 atgcagcgaa aaagggggtg gtcaaggctg agaggagcaa gaaaaagaag gaagaggaag
      661 acgacgagga ggatgaagat gatgaggaag aggaggaaga ggaagatgaa gatgatgaag
      721 aagatgatga tgatgaataa
//
