LOCUS       XM_039078192             542 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L23a
            (LOC690335), mRNA.
ACCESSION   XM_039078192
VERSION     XM_039078192.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039078192.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..542
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..542
                     /gene="LOC690335"
                     /note="similar to 60S ribosomal protein L23a; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 12 Proteins, and 97% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:690335"
                     /db_xref="RGD:1597353"
     CDS             16..462
                     /gene="LOC690335"
                     /codon_start=1
                     /product="60S ribosomal protein L23a-like"
                     /protein_id="XP_038934120.1"
                     /db_xref="GeneID:690335"
                     /db_xref="RGD:1597353"
                     /translation="MAPKAKKEAPAPPKAEVKGKALKAKKAVLKGVDSHKKKIRTSPT
                     FRRPKTLRLRRQPKYPRKGAPRRNKLDHYAIIKFPLTTESAMKKIEDNNTLVFVVDVK
                     ANKHQIKQALKKLYDIDVAKVNTLTFAVGLTERIRRMFAWLLIMTL"
ORIGIN      
        1 atttttttcg ccaagatggc gccgaaagcg aagaaggaag ctcctgcccc tcccaaagcc
       61 gaagtcaaag ggaaggcctt gaaagctaag aaggcagtgc tgaaaggtgt cgacagccac
      121 aaaaagaaga tccgaacgtc acccactttc aggcggccca agaccctgcg gctccggagg
      181 cagccaaaat atcctcggaa gggtgcaccc aggagaaaca aacttgacca ctatgctatc
      241 atcaaattcc cactgaccac cgagtcagcc atgaagaaaa tagaggacaa caacacgctt
      301 gtgttcgttg tggatgttaa ggccaacaag caccagatca aacaggccct gaagaaactc
      361 tatgacattg acgtggccaa agtcaatact ctgactttcg cagtaggcct gacggagaga
      421 ataaggcgta tgttcgcttg gctcctgatt atgacgctct agatgttgcc aacaagattg
      481 ggatcatcta aagtgagtcc agatggttaa ttctaaatat atactttttt ttccaccata
      541 aa
//
