LOCUS       XM_039101335            2863 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to SUMO/sentrin specific
            protease 5 (LOC690251), mRNA.
ACCESSION   XM_039101335
VERSION     XM_039101335.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039101335.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2863
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2863
                     /gene="LOC690251"
                     /note="similar to SUMO/sentrin specific protease 5;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 ESTs, 5 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:690251"
                     /db_xref="RGD:1582860"
     CDS             179..2431
                     /gene="LOC690251"
                     /codon_start=1
                     /product="sentrin-specific protease 5-like"
                     /protein_id="XP_038957263.1"
                     /db_xref="GeneID:690251"
                     /db_xref="RGD:1582860"
                     /translation="MKKQKKILWKKGIHLAFSEKWNTGFGGFKKLYFPQNLCFLKAKL
                     GRPVVWHRQSKHFQCNKRGLHIQKTWAQDVPLCSKTKSGVATQNVSSLYAKVKRKDTK
                     HFISSSRSLLKLQADKLLSSAKNLGREYCREKSLLKAGPGLSANTVLGKANGHKPSTD
                     PQASDFPMKFNGESQSPSDSGKTVVLNKHRKRVCYGCYQGLEHHRNRRPLIPKKFQPN
                     QYRRVKVSLMMYEKLSMIRFRYRIFRSQHFRTKSRVCKLRKAQQSWVQKVTGDHQENF
                     RDNNTEGGDCSPVPSLEPKDPCRCQPYFPDMDSSAVVKGKNCHVPDGHTKESPALDKE
                     HGLDAAFPDQQNGSTTYTWDQPFSSPKWECTEQIHEIPLMGHPSSDNFTPGTERALMT
                     LGQESGTSAVSDDGVKLSVSGADESVSSVDGPVSEEPAQNKNFQMEEDGSLRQNILSL
                     KLLDHPYCKSPLDAPLVCSELKVENQVAGGKSGQTASPVDDEQLSTCLSGFLDEVMKK
                     YGSLVPLSEKDVLGRLKDVFNEDFSNRKPFINREITNYRARHQKCNFRIFYNKHMLDM
                     DDLATLDGQNWLNDQVINMYGELIMDAVPDKVHFFNSFFHRQLVTKGYNGVKRWTKKV
                     DLFKKSLLLIPIHLEVHWSLITVTLSSRIISFYDSQGIHFKFCVENIRKYLLTEAREK
                     NRPEFLQGWQTAVTKCIPQQKNDSDCGVFVLQYCKCLALEQPFQFSQEDMPRVRKRIY
                     KELCECRLLD"
ORIGIN      
        1 aaaaaaaaaa aaaaaaaaaa aactggaagc tgggccgcct cgccggccga aagcaggccg
       61 gagccccggt cgctggcctg gcttctccgg gcgagggcga ggcagcggtc caggcagaag
      121 attagatgcc gggagcaaag aaagtagtta catccaattc tcattatgca tcagaaaaat
      181 gaaaaaacag aagaaaattc tatggaagaa aggaattcac ttagcctttt ctgagaaatg
      241 gaatacggga tttggaggct ttaagaaact ctattttccc caaaacttgt gctttctgaa
      301 agctaagctg ggaaggccag ttgtttggca tcggcagtcg aagcatttcc agtgtaataa
      361 gaggggtctt cacatccaga aaacatgggc ccaggatgta ccactttgtt caaagaccaa
      421 atctggagtg gccactcaaa atgttagttc tttgtatgcc aaagtgaaaa gaaaggacac
      481 taagcacttc atttcctctt ccaggagtct cctgaaactc caagcagata aattactttc
      541 ttcagcaaag aacttgggcc gtgaatactg cagagagaaa agccttctga aggcaggtcc
      601 tggcttgtcg gcaaatactg ttttaggtaa ggccaatggt cacaaaccta gcacggaccc
      661 acaagcttca gactttccca tgaagttcaa tggggagagc caaagtccaa gtgacagtgg
      721 caagactgtg gttttgaaca aacatagaaa acgagtttgt tatggctgct accaagggct
      781 agagcaccac aggaacagga gacccctgat tccaaaaaag ttccaaccta accaatatcg
      841 aagagtcaaa gtgtctctta tgatgtatga gaaactatcc atgattagat ttcggtatag
      901 gattttcaga tcccagcact tcagaacgaa aagcagagtt tgcaagctaa gaaaagccca
      961 gcaaagctgg gtgcagaagg tcactgggga ccatcaagag aactttaggg ataacaacac
     1021 tgagggtggc gattgcagcc cagtcccttc cctagaacct aaagaccctt gtcggtgtca
     1081 gccatacttt ccagacatgg acagtagtgc tgtggtgaag ggaaaaaact gtcacgtgcc
     1141 tgatggccac actaaagaaa gtcctgcctt ggacaaggag catggtttag atgcagcatt
     1201 ccctgaccag cagaatggca gcaccacata cacttgggac cagccattct cttctcctaa
     1261 gtgggagtgt acagagcaaa ttcatgaaat ccctttgatg ggacatcctt ctagtgacaa
     1321 cttcactccg ggaactgaaa gagctcttat gactctgggg caggaaagcg ggacaagtgc
     1381 tgtcagcgat gacggagtga agctgtcagt gtctggagca gacgaatctg tgagtagtgt
     1441 agatgggcct gtgtctgagg agcccgctca gaataagaac ttccagatgg aggaggatgg
     1501 gtctctcagg cagaacattc ttagtttgaa actgctggac cacccttact gtaagagtcc
     1561 actggatgct cccttggtgt gcagtgagct caaagtagaa aaccaagtgg caggtggcaa
     1621 gagtggccag acagcgtctc ccgtggatga tgagcagctc tcgacctgcc tttctgggtt
     1681 cctagacgag gttatgaaaa agtatggaag tctggtccca ctcagtgaga aagatgtcct
     1741 tgggagatta aaagatgtct ttaatgaaga cttttctaat agaaaaccat ttatcaatag
     1801 ggaaataaca aactaccggg ccagacatca aaagtgtaac ttccgaatct tctacaacaa
     1861 gcacatgctg gatatggacg acctggcaac tttggatggt cagaattggt tgaatgacca
     1921 ggttattaat atgtatggcg agctgataat ggatgcagtc ccagacaagg tccacttctt
     1981 caacagcttt ttccatagac agctggtaac caaaggctat aatggagtta agagatggac
     2041 taagaaggtg gatttgttta aaaagagtct tctgttgatt cccatccacc tggaggtcca
     2101 ctggtctctc attactgtga cactctccag tcggattatt tcattttatg attcccaagg
     2161 cattcatttt aaattttgtg tagagaatat aagaaagtat ttgctgactg aagccagaga
     2221 aaaaaataga cctgaatttc ttcagggttg gcagactgct gttacaaagt gtattccaca
     2281 acagaaaaat gacagtgact gtggagtctt tgtgctccag tactgcaagt gcctcgccct
     2341 agagcagcct ttccagtttt ctcaagaaga catgcctcga gtgcggaaga ggatctataa
     2401 ggagctgtgt gagtgccggc tcctggactg acactcactc agcagggact ccagaaggcg
     2461 ccatgttgga gcagatggtt tgttacttga atctccaaac acttactgaa tctttacaga
     2521 tacttcagat tggtggtatt gggccactta ttgttacctc agatttattt ttgcccttca
     2581 tttctcctgc tatcatgtac ttttttttta atgttcaatt tagtttcatt tttaacttta
     2641 tggattccat acgtccctcc catatttaat atttattatc caaacgcatg catatagaca
     2701 gagcatgcag taaagagtat taaaaaaaag cctagtagat ttggtgcagc ttttgaaaca
     2761 tagatgtgaa ctgaatacag gtttaaaagt taaccccaga acctaaaaat gcaagatgtt
     2821 tttgatacag catagtcaga atagatgttc cccatggcat aaa
//
