LOCUS       XM_039087590            1970 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to kidney injury molecule 1
            (LOC689968), mRNA.
ACCESSION   XM_039087590
VERSION     XM_039087590.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 32% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1970
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1970
                     /gene="LOC689968"
                     /note="similar to kidney injury molecule 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 85% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:689968"
                     /db_xref="RGD:1586332"
     CDS             1..774
                     /gene="LOC689968"
                     /codon_start=1
                     /product="uncharacterized protein LOC689968"
                     /protein_id="XP_038943518.1"
                     /db_xref="GeneID:689968"
                     /db_xref="RGD:1586332"
                     /translation="MVKGFEACLLQDGEENSECLVNSLPNRALISSKCRGFSVSSVEY
                     QANAEVIKSILMTAIVSLKRLEKAYPFFSDRKSCNLLIRVASGSFPEVYGMGGEPVTL
                     PCSYPESRALSFVCWGRGECASDTCGQTLVWTDGNRINYRTSSRYQINAQLLQGNASL
                     TIDYAYVSDSGLYCCRVEMKGWDGVQTLTTSLQVQPGSNSTRTKGLAIGLSIFVLLLV
                     LVSSLVVANYIFMKKRPGSQSLVAFCVSKIRTLLNKEAA"
ORIGIN      
        1 atggtgaagg gctttgaggc ctgtctactc caggacggtg aagaaaattc tgagtgtttg
       61 gtcaacagtt tgcccaacag ggctctgatc tcttccaagt gcagaggctt tagtgtgagt
      121 agtgtggagt accaggccaa tgctgaggtc attaaaagca tcctcatgac agccattgtc
      181 agcctcaaga gactagaaaa ggcttacccc ttcttctctg acaggaagtc atgcaatctt
      241 ctgatcagag ttgcttcagg atcattcccg gaagtatatg gaatgggggg tgagcctgtg
      301 acgctgccat gttcttatcc tgaatctcgt gcactctcat tcgtgtgctg gggccgaggc
      361 gaatgtgctt ctgatacgtg tggacaaaca cttgtctgga ctgatggaaa ccgaatcaac
      421 tatcggacaa gcagtcgcta ccagatcaac gcgcagcttc ttcaaggaaa tgcatccttg
      481 accatcgatt acgcctatgt gagtgacagc ggtctctact gctgccgagt ggaaatgaag
      541 ggatgggatg gtgtgcagac actgaccacc tcactgcagg ttcaaccagg aagcaattcg
      601 accaggacta aaggccttgc tattggtctc tccattttcg tgctgcttct agttcttgtg
      661 agctcattag ttgtggcaaa ttacatattt atgaaaaaga ggccaggatc tcaaagcttg
      721 gtagcctttt gtgtttctaa gatcagaact ttactaaata aagaggctgc gtgaccacga
      781 gcccaagaca acggacgtct acaatattga agacgatctt catgtcagcg tttaagtttc
      841 aggagaagac agctacggca tatcaccagg ctggacaccc cttaagtgcc tggactattt
      901 tctgtgtcag ttcaccttga gttcccactt tgcagcggca gtggagaggc tgcccctcta
      961 gctgtctctt tgcatatcca ctgctgacat gatgccgtct ctccacacta ccgatccttc
     1021 cttcaaacac gaatgcttga acattttggg cgtcctttag gccccataat tcttttgtct
     1081 gcgaaaagca attattggta atatctatct tagttactaa aaccatccag caaagaggaa
     1141 taggatttta aagtaaaact aaaataaaac aaatgtggat ttaattaagg aggatgagat
     1201 ttaatttaga tttgattcat gattctgctt tgtttatgta attagtggat gccatacagg
     1261 aagagctccc tggagatggc ccactgtctg ctcagctgca atgggactag tctggtgagg
     1321 catggccaca aagacttcgt cccaggattg cttcttgtta ctgatgcgct ttctcaaatt
     1381 tgtcactgcc atactcctca tttatttatt ttttttttcg gttctttttt tcggagctgg
     1441 ggaccgaacc cagggccttg cgcttcctag gcaagcgctc taccactgag ctaaatcccc
     1501 aacccccata ctcctcattt atgtggcttc atgtaagtgg acaccaagag accctcactg
     1561 cctatagcct tctgtgaata ctttctgggt gacagcccac cctattgggc atatttccta
     1621 gagaccaaca agaagatgac ttgtcatgaa ttaatgacaa ataatttaat gactttacag
     1681 gattcgtgat ttgattcaga taattttagg aagaaaattt gaggagatga ttttagctgt
     1741 tttgccaaga agatgtaata aaggtagaat aaagaatagc ataagactcc ctcctcatag
     1801 aatagtaagt aaaaatcaac ataataggga attgcataaa ttgcactaag aaaagaaata
     1861 ggtttgagac aaatttgtga tcaaggataa acactcaatc taggtcagat ccaagcatga
     1921 ggccatgggt gttcactatg ataatgaact tatagaatga aacactgctt
//
