LOCUS       XM_039084520            1573 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to zinc finger protein 622
            (LOC689966), mRNA.
ACCESSION   XM_039084520
VERSION     XM_039084520.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084520.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1573
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1573
                     /gene="LOC689966"
                     /note="similar to zinc finger protein 622; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:689966"
                     /db_xref="RGD:1586334"
     CDS             50..1360
                     /gene="LOC689966"
                     /codon_start=1
                     /product="zinc finger protein 622-like"
                     /protein_id="XP_038940448.1"
                     /db_xref="GeneID:689966"
                     /db_xref="RGD:1586334"
                     /translation="MATYTCITCRVAFRDAEMQRAHYKTDWHRYNLRHKVANMAPVTA
                     EGFQERVRAQRAVAEEESKGTATVCSKKFATFNAYENYLKSRLHVELEKKTVQAVSRQ
                     VEMMNEKNLEKGLGVDSVNKDAMNAAIQQAIKAQPSTSPKKAPFMPTDESRRVAGAVR
                     RGTREQDPTEKPPWLQWFEQQEKKLAKQQWEESEEEGEEDDEDWEDIDSDDGLECENP
                     GVEEEDAEDAEAEESPPLGAIPITDCLFCSHHSSSLVKNVAHMTKVHSFFIPDIEYLS
                     DLKGLIKYLGEKVGAGKICLWCNEKGKSFYSTEAVQAHMNDKSHCKLFTDGDAVLEFA
                     DFYDFRSSYPDYKEGQDPAEIEDLSLECDDETMELIIPSGARVGHRSLMRYYKQRFGL
                     PRAVTVARNQKAVGRVLQQYRALGWTGSTGAALMRERDMQYVQR"
ORIGIN      
        1 caagagtaga aggtcctcgg ctaggtcgtc tcttccttcc ggcccgacaa tggcgacgta
       61 cacctgcatc acctgccggg tggcgttccg cgatgcggag atgcagcggg ctcactacaa
      121 gaccgactgg caccgctaca acctgcggca caaggtggct aatatggccc cggtgaccgc
      181 cgaaggcttc caggagcggg tgcgagcgca gcgggcggtg gcggaggagg agagcaaggg
      241 cacggccacc gtgtgcagca agaagttcgc cacgttcaac gcctacgaga actaccttaa
      301 gtcccggctg cacgtggagc tggagaagaa gacggtgcag gccgtgagcc gccaagtgga
      361 gatgatgaac gagaagaact tggagaaggg actgggcgtg gacagtgtga acaaggatgc
      421 catgaacgcc gccatccagc aggccatcaa ggcccagcct tccacgtctc ccaagaaagc
      481 gcccttcatg cccacggacg aatccaggag ggtggcgggc gcggtccgac ggggcacccg
      541 ggagcaagac ccgacggaga agccgccctg gctccagtgg ttcgaacagc aggagaagaa
      601 gctggcgaag cagcagtggg aggagagtga ggaagaggga gaggaagacg acgaagattg
      661 ggaagatatt gattccgatg atggattgga atgtgagaac cctggagtgg aggaagagga
      721 tgcagaagat gcagaggctg aggagagccc acccctaggt gccatcccaa taacagactg
      781 cttattttgt tcccatcatt caagctccct tgtgaagaat gtggctcata tgactaaagt
      841 ccacagcttt tttattcctg atatagagta tctttcagat ttgaaaggat taattaaata
      901 tttgggagag aaagttggtg ctggcaaaat ctgcttgtgg tgcaatgaga aagggaagtc
      961 cttctattcc acagaagctg tgcaggcaca catgaatgac aaaagccact gtaagctctt
     1021 tacagatggt gatgctgtgc tggagtttgc agacttctat gattttagga gtagctaccc
     1081 agattacaag gaggggcagg atcctgctga gattgaagac ttgtccttgg aatgtgatga
     1141 tgaaaccatg gagctgataa ttccctctgg tgccagggtg ggtcatcgct ccttgatgag
     1201 atactacaaa caacgatttg gcttgccaag agctgtgaca gttgctagaa atcaaaaggc
     1261 tgtgggcagg gtcctccagc agtaccgagc cctggggtgg acgggcagca caggagcagc
     1321 tctcatgcgt gaacgggata tgcagtatgt acagaggtga agtcgaaatg gatgctgaag
     1381 accgggatga agaacaatgc caccaagcag atgcacttta gggcccaagt gagattctga
     1441 gaggctgagg ctgagagatg tatctctggc tgcattccct ccttgtctga ggaccagtga
     1501 agccagattg ccgaatggtt cttttgctgc tacttcattt gttctgatct aataaagtca
     1561 agatcataaa aaa
//
