LOCUS       XM_039078180             447 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein L27
            (LOC689965), mRNA.
ACCESSION   XM_039078180
VERSION     XM_039078180.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039078180.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..447
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..447
                     /gene="LOC689965"
                     /note="similar to ribosomal protein L27; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 long SRA read, 30 Proteins, and 97% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:689965"
                     /db_xref="RGD:1586335"
     CDS             1..360
                     /gene="LOC689965"
                     /codon_start=1
                     /product="60S ribosomal protein L27-like"
                     /protein_id="XP_038934108.1"
                     /db_xref="GeneID:689965"
                     /db_xref="RGD:1586335"
                     /translation="MSKFMKPGKVVLVLAGRYFGRKAVIMKDIDDGTSDRTYSHALVA
                     GIDHYPRKVTAAMEKKIAKRSKIKSSVKVYNYNHLMPTRYSVDIPLDKTVVNKDVFRD
                     PALKCKARREAKVKFEE"
ORIGIN      
        1 atgagcaagt ttatgaaacc tggaaaagtg gtgctggtcc tggctggacg ttacttcgga
       61 cgcaaagctg tcatcatgaa ggacattgat gatggcacct ccgaccgcac ttacagccat
      121 gccttggtgg ctggaattga ccactatccc agaaaagtga cagctgccat ggaaaagaag
      181 attgccaagc gatccaagat caagtcctct gtgaaagttt ataactacaa ccacctcatg
      241 cccacaaggt actctgtgga tatccccttg gacaaaactg ttgtcaacaa ggatgtgttc
      301 agagacccag cactgaaatg caaggccagg cgggaggcca aggtcaagtt tgaggagtga
      361 tacaagacag ggaagaacaa atggtttttc cagaagcttc gcttttagat gtatttttgt
      421 tttcgtcatt aaaaaattaa aaaaaaa
//
