LOCUS       NM_001271399             821 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus similar to human chromosome 1 open reading frame
            185 (C5h1orf185), mRNA.
ACCESSION   NM_001271399 XM_001071277 XM_003754078
VERSION     NM_001271399.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 821)
  AUTHORS   Florea,L., Di Francesco,V., Miller,J., Turner,R., Yao,A.,
            Harris,M., Walenz,B., Mobarry,C., Merkulov,G.V., Charlab,R.,
            Dew,I., Deng,Z., Istrail,S., Li,P. and Sutton,G.
  TITLE     Gene and alternative splicing annotation with AIR
  JOURNAL   Genome Res 15 (1), 54-66 (2005)
   PUBMED   15632090
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000005.1.
            
            On Apr 6, 2023 this sequence version replaced NM_001271399.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.2785620.1,
                                           SRR26643293.29087.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760389 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-86                JAXUCZ010000005.1  129524376-129524461 c
            87-192              JAXUCZ010000005.1  129519461-129519566 c
            193-325             JAXUCZ010000005.1  129512904-129513036 c
            326-362             JAXUCZ010000005.1  129508923-129508959 c
            363-821             JAXUCZ010000005.1  129504701-129505159 c
FEATURES             Location/Qualifiers
     source          1..821
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q35"
     gene            1..821
                     /gene="C5h1orf185"
                     /note="similar to human chromosome 1 open reading frame
                     185"
                     /db_xref="GeneID:689589"
                     /db_xref="RGD:1591038"
     exon            1..86
                     /gene="C5h1orf185"
                     /inference="alignment:Splign:2.1.0"
     CDS             71..757
                     /gene="C5h1orf185"
                     /note="rCG50434-like"
                     /codon_start=1
                     /product="uncharacterized protein C1orf185 homolog"
                     /protein_id="NP_001258328.1"
                     /db_xref="GeneID:689589"
                     /db_xref="RGD:1591038"
                     /translation="MASPNGFFSHLTYFLAAGAVSLGIGFFALASALWFLICKRREIF
                     ESSNFKAISEKVNQGSCKPKLKAHPQCVFISRNFHVGQSQQVEKKEREEEQIKAIRNH
                     SKVEFCTLDPASRESPEMTSVVNGSSVATMSVSTSMSSSYCSQSVEAAEDWFSDNSLE
                     AKNPSKPLLGEPLAEKVLAYLSSISLEEWPGNSANTTFCSAEKAESVKEMFVQKNTEV
                     SKHNLQFDIE"
     exon            87..192
                     /gene="C5h1orf185"
                     /inference="alignment:Splign:2.1.0"
     exon            193..325
                     /gene="C5h1orf185"
                     /inference="alignment:Splign:2.1.0"
     exon            326..362
                     /gene="C5h1orf185"
                     /inference="alignment:Splign:2.1.0"
     exon            363..821
                     /gene="C5h1orf185"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaagaaaga actccagaaa gcttttatga caccactgtg ctcagattcc attagtcaga
       61 actctgtctc atggcttcac ctaatggttt ctttagtcac ttaacctatt ttttggctgc
      121 tggtgctgtt agtctgggaa ttggattctt tgctttggca tcagctctgt ggttcctgat
      181 ttgcaaacga agagaaatat ttgagagttc caattttaag gccatcagtg aaaaggtgaa
      241 ccaaggatca tgcaaaccaa agcttaaagc tcaccctcag tgtgttttca tttcccggaa
      301 cttccatgtc ggccagtcac aacaggtgga gaaaaaagaa agggaagaag aacaaataaa
      361 agctatcaga aatcactcta aagttgaatt ctgcaccctg gatcccgcca gccgtgagtc
      421 ccctgagatg acctcagtag tcaatggcag cagtgtggca acaatgagtg tatcaacatc
      481 catgtctagt tcttactgca gccaaagcgt agaagcagct gaagactggt tttctgataa
      541 ttctcttgaa gccaagaacc cctcaaagcc tttgctcggg gagcctctag ccgagaaggt
      601 gcttgcatac ctgtcatcca tttcattaga agaatggcct ggaaactcag cgaacacaac
      661 attttgtagt gcagaaaaag ctgagagcgt taaggaaatg tttgtacaaa aaaacacaga
      721 ggttagcaaa cacaaccttc agtttgacat tgaatgactt tttttttctt ttgaaacctg
      781 gtatagaatg aaagcaggta aagttaaaac tgcaccatga a
//
