LOCUS       XM_039110970             538 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein S12
            (LOC689481), mRNA.
ACCESSION   XM_039110970
VERSION     XM_039110970.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039110970.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..538
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..538
                     /gene="LOC689481"
                     /note="similar to ribosomal protein S12; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 28 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 51 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:689481"
                     /db_xref="RGD:1592281"
     CDS             96..494
                     /gene="LOC689481"
                     /codon_start=1
                     /product="40S ribosomal protein S12-like"
                     /protein_id="XP_038966898.1"
                     /db_xref="GeneID:689481"
                     /db_xref="RGD:1592281"
                     /translation="MAEEGIAAGGVMDANTALQEVLKTALIHDGLARGIWEAAKALDK
                     RQAHLCVLASNYDEPMYVKLVEALCAEHQVNLIKVDDNKKLGEWVGLCKIDRKGKPRK
                     VVGCSCVVVKDYGKESQAKDVIKEYFKCKK"
ORIGIN      
        1 gagaccggag ttcagacgtg tgctcttccg atctgttccg cggaggcgga agctcgggtg
       61 cgttcaagat tcggagtcac ccgtaatcca ccgccatggc cgaggaaggc atagctgctg
      121 gaggtgtaat ggacgccaac actgctctac aagaggtgct gaagaccgcc ctcatccacg
      181 atggcctagc acgtggcata tgggaagctg ccaaagcctt agacaagcgc caagcccatc
      241 tctgtgtgct tgcatccaac tatgatgagc ccatgtatgt caagctggtg gaggcactct
      301 gtgctgagca ccaggtcaac ctcataaaag ttgatgacaa caagaaacta ggggaatggg
      361 taggcctctg taaaatcgat cgaaagggga aaccacggaa agtagttggt tgcagttgcg
      421 ttgtggttaa ggactatggc aaagaatctc aggccaagga tgtcatcaag gagtacttca
      481 aatgcaagaa atgaataaat aaaattttgg ctcaaaaaaa aaaaaaaaaa caaaaaaa
//
