LOCUS       XM_039084366            1558 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical protein LOC689268
            (LOC689268), transcript variant X1, mRNA.
ACCESSION   XM_039084366
VERSION     XM_039084366.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039084366.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1558
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1558
                     /gene="LOC689268"
                     /note="hypothetical protein LOC689268; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 3 Proteins, and 98% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:689268"
                     /db_xref="RGD:1594784"
     CDS             1..780
                     /gene="LOC689268"
                     /codon_start=1
                     /product="disks large homolog 5-like isoform X1"
                     /protein_id="XP_038940294.1"
                     /db_xref="GeneID:689268"
                     /db_xref="RGD:1594784"
                     /translation="MFRQLLKLFRKERGDQGETTPRQKEDDLLSSKTGRKKSFWGRLG
                     FGRKTSSQIVISEQEKCRKELEELKLEIQKCKFERDELYQILDFYIYDDWDLRLDVEL
                     PILQSEHERRMMAMQMMTNSISDAMERYKELIQVNSSYHIRHSQLLCEQTQLKNKIQI
                     LLNEKREQLVEQTELPASSVEAKRLCEEARMNICDPRAKQQQGRLRLQEVSQTRIFPG
                     EDACRNGKEKVVLVICGGCCPSSPLLPVYEESVCMLHRAWV"
ORIGIN      
        1 atgtttcgcc agctgctcaa gctatttcga aaggaaaggg gagatcaagg agagaccaca
       61 ccaaggcaga aggaggatga cctcctctct agtaaaacag gaaggaagaa atcattctgg
      121 ggaaggcttg gatttggtag gaagacatca tcccaaattg tcatcagtga gcaagagaag
      181 tgtcgaaagg aactggagga actcaaactt gaaatccaga agtgtaaatt cgagagggat
      241 gaactttatc aaatcctgga cttttatatc tatgatgatt gggacctcag gctggatgtc
      301 gaattgccaa tacttcaatc cgaacatgag aggagaatga tggctatgca aatgatgacc
      361 aactcaataa gtgatgccat ggagaggtac aaggagctca tacaagtgaa cagttcctac
      421 cacatcaggc actcccagct cctgtgtgaa caaactcaat tgaagaacaa aatacagatt
      481 ttgctgaatg agaagagaga acagctggtg gagcagactg aactgccagc atcctctgtg
      541 gaggcaaaga ggctctgtga agaggccaga atgaacatct gtgaccccag agccaagcaa
      601 cagcagggac gtttgagact ccaggaagta agtcaaacca gaatcttccc gggggaagac
      661 gcatgtagaa atggcaaaga aaaggttgtc cttgtcattt gtggtggctg ttgtccttct
      721 tcccctcttc tccctgtata tgaagaaagt gtctgcatgc ttcatagagc ttgggtctga
      781 aattctccag cagaaactcg aacatgacac agacctgggc aagatctccc ttggtgagaa
      841 gtggtacagg aggagaacaa agtgtgcaca gcaaatacac cactattgca tctcatctgt
      901 aatgtccata gcaactgtgg actgcatttt cctcctttag tttgaattct ttggattgaa
      961 taggccgtac tttcaccttg cctctctcca gcaagtgtac agttttggag ggacccagag
     1021 aagtcctgat gcacatcaat caagagctgc tggtcatcca gaaagactgt tcgtgtgtaa
     1081 atttgtactt gtcctgatgg gtcatccaga agggtttcat ggagatcagt ccacaacatt
     1141 ggaaagactt tgagacaaag gctgtgatgt attttatact cggtattgga tggtcttgtc
     1201 cttcataccc cacttcaata gaagagacct ccttacattc cacttgaaaa gattattacc
     1261 atcagtaact gcttatctat tatgttccaa ggccaaccac gggatataag tctgttctgc
     1321 aaaatgagta gcaaaagaat gtttagcata attcctctgt ttagattttg gcttgaattt
     1381 tgattatttt ggtttttctt gtattcattt gaaagtttgg tatttatttg tttttgtttt
     1441 attcttgcag ttgattcgct attttgatga ggatatagac tgtatatatt gactacccgc
     1501 atctggttac tattgagtaa attggatgta ttcctttaaa taaaacagta atctcaaa
//
