LOCUS       XM_039097297             723 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical protein LOC689166
            (LOC689166), mRNA.
ACCESSION   XM_039097297
VERSION     XM_039097297.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051353.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097297.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..723
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="18"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..723
                     /gene="LOC689166"
                     /note="hypothetical protein LOC689166; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins, and 99% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:689166"
                     /db_xref="RGD:1596138"
     CDS             1..312
                     /gene="LOC689166"
                     /codon_start=1
                     /product="prothymosin alpha-like"
                     /protein_id="XP_038953225.1"
                     /db_xref="GeneID:689166"
                     /db_xref="RGD:1596138"
                     /translation="MSDAAVDISSKITTKDLKEKKEVVEEAENGRDPPANGNAQNEEN
                     GEHEADNEVDEEEEEEEGDGEEEDGDEDEEAEAPMGKRVAQDDQDDDVDTKKQKTDEE
                     D"
ORIGIN      
        1 atgtcagacg cagcagtgga catcagctcc aagatcacca ccaaggactt gaaggagaag
       61 aaggaagttg tggaagaggc agagaatgga agagatccac ctgccaatgg gaacgctcaa
      121 aatgaggaaa atggggagca cgaggctgac aatgaggtag atgaagagga ggaggaggag
      181 gaaggtgatg gtgaggaaga ggatggagat gaagatgagg aagctgaggc tcctatgggc
      241 aagcgggtag ctcaggacga tcaggatgat gatgttgaca ccaagaagca gaagactgat
      301 gaggaggact agacagcaaa atgaaaagct aaccttacac acggtgacat attcaccctc
      361 cacttccggt ctcagaattt aaacgtggtc accttccact agagaagcag gccccgccca
      421 cccactgcgg gctgtgccac ccacagatga cgtgcgctct ccaccacccc accaaaacca
      481 caacatgaat tggcaacaag ggaggagaaa agaaccagaa cttcccagga cctgcttttt
      541 ttcttaaaaa tactctaaaa ggaaaatttg taattttaat ttacatttta tatttttgta
      601 catattgtta ggggtcagcc atttataatg ataacgggtg accaatccag tcttcagagc
      661 attttctgtc ctacttcaga ctttacttgt ggtgtgacca tgttcattat acgctcaaag
      721 gag
//
