LOCUS       XM_001069291             990 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus similar to human chromosome 17 open
            reading frame 50 (C10h17orf50), mRNA.
ACCESSION   XM_001069291
VERSION     XM_001069291.7
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086028) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On May 8, 2024 this sequence was replaced by
            NM_001430278.1.
            
            On Jan 21, 2021 this sequence version replaced XM_001069291.6.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..990
                     /gene="C10h17orf50"
                     /note="similar to human chromosome 17 open reading frame
                     50; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 EST, 87 long SRA reads, 2 Proteins"
                     /db_xref="GeneID:689039"
                     /db_xref="RGD:1597447"
     CDS             124..699
                     /gene="C10h17orf50"
                     /codon_start=1
                     /product="uncharacterized protein C17orf50 homolog"
                     /protein_id="XP_001069291.2"
                     /db_xref="GeneID:689039"
                     /db_xref="RGD:1597447"
                     /translation="MDKHGVKTPLWRKEVEDPEAREEELEDDSSSSSSSSSVEEKSDP
                     ESATTGEPEEDTRDADEREARSVSYSPLRQESSSQQVALLRRSDSSFWGWLSPFALLG
                     SLAAPADRKRGAPEEPCVLETRRRPPRHGGCARCEILFCKKCKTLHSHPAYVEHCIFE
                     HPDLGTAEAAGSSELIYSQPLRPQCSKLFYL"
     polyA_site      990
                     /gene="C10h17orf50"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tagaactacc cccctgtgat ctaacagatg ccctagaaac catatggagt tctataggca
       61 ctgggcatcc cccacatccc agttcctgac cagagggaac aggcaggaca agcattggga
      121 aagatggata aacacggcgt gaagactcct ttgtggagga aggaggttga ggatcctgag
      181 gccagggagg aggaactgga ggacgattct tcgtcgtcgt cctcgtcgtc gtcggtggag
      241 gagaagtcgg acccagagag cgcgacaact ggagagccgg aggaggacac ccgagacgcg
      301 gatgagcgcg aggcccgctc ggtgtcctac agtccgctgc gccaggagtc cagcagccag
      361 caggtggcgc tgctgcgacg ctcggacagc agcttctggg gctggctcag cccgttcgct
      421 ctgctaggta gcctggcggc ccccgcggac aggaagcggg gtgccccgga ggaaccgtgc
      481 gtgttggaga cgcggcggcg gccaccgcgc cacggaggct gtgcgcgctg tgagatcctt
      541 ttctgcaaga aatgcaagac cctgcacagc cacccggcct acgtggagca ctgtattttt
      601 gagcaccctg acctgggtac ggcggaggcc gccggcagct ctgagctcat atactcccag
      661 cctctgcgcc cgcaatgctc caaactcttc tatctctaat gagttccaca gaactgtccc
      721 ttcaagctgc catccttagc gcctcctcct ggtgagaaga tccactgtcg gttcactgtt
      781 ccacctgttg tcttgcggaa ctgtagcaga aactaggcac tccttcccag acagtaccca
      841 gcacccacgg ctttcctgac cctcacgtct ccaacacagc cttacctgtg tcatttttag
      901 gttctctggc ctctctccag gcatggcctg gagaaaaata gtcttggggt tccctcagcc
      961 ctcttaataa attgcctctt tccctcttaa
//
