LOCUS       XM_039111514             387 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein S26
            (LOC688948), mRNA.
ACCESSION   XM_039111514
VERSION     XM_039111514.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111514.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..387
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..387
                     /gene="LOC688948"
                     /note="similar to ribosomal protein S26; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 long SRA read, 24 Proteins, and 70% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:688948"
                     /db_xref="RGD:1582959"
     CDS             16..363
                     /gene="LOC688948"
                     /codon_start=1
                     /product="40S ribosomal protein S26-like"
                     /protein_id="XP_038967442.1"
                     /db_xref="GeneID:688948"
                     /db_xref="RGD:1582959"
                     /translation="MTKKRRNNGCAKKGHSHVQPICCTNCARCVPKDKAIKKFVIRNI
                     VEAAAVRDISEAGVFDTYVLPKLYVKLHYCVSCAIHSKVVRNRSCEARKDRTPPPRFR
                     PAGAAPRPPPKPM"
ORIGIN      
        1 agtcttagct ccaatatgac caaaaaaagg agaaacaacg gttgtgccaa aaagggccac
       61 agccacgtgc aaccaatttg ctgcacaaac tgcgcccggt gcgtgcccaa ggataaggcc
      121 attaagaagt ttgtcattcg gaacattgta gaagccgctg cagtcaggga catatctgaa
      181 gcaggcgtct ttgacactta tgtgcttccc aagctctatg tcaagctgca ctactgcgtg
      241 agctgtgcca ttcatagcaa ggtcgtcagg aatcgatctt gtgaggcccg gaaggaccga
      301 acacccccac cacgattcag acctgctggc gctgcaccac gacctccacc aaagcccatg
      361 taaagaggtg atttcatgaa ggcagaa
//
