LOCUS       XM_006257588             697 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to RIKEN cDNA 1700001F22
            (LOC688702), mRNA.
ACCESSION   XM_006257588
VERSION     XM_006257588.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006257588.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006257588.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..697
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..697
                     /gene="LOC688702"
                     /note="similar to RIKEN cDNA 1700001F22; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 7 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:688702"
                     /db_xref="RGD:1585304"
     CDS             136..642
                     /gene="LOC688702"
                     /codon_start=1
                     /product="high mobility group protein B4-like"
                     /protein_id="XP_006257650.1"
                     /db_xref="GeneID:688702"
                     /db_xref="RGD:1585304"
                     /translation="MGIDSKVRPKVNVSPYVHFMMDFRNQTREQQPNTYYDFTEFSRK
                     CSEKWRTISKKEKKKYEALAKRDKDRYQREMRNYSGPRRERRRRDPDAPRKPPSSFLL
                     FSQDHFDEIKEQHPNWTVAQVAKAAGRMWARCSEADKIPYEERAAVLRAKYLEEREAY
                     YHQCQRGE"
ORIGIN      
        1 aaaggctggg ccctggctga ggcgcacaca gagggaagat ttcaccccat ggaggacact
       61 gtctaggctg ctcctgtagt gaagaccaat cgctgctctc caatcagcag gatcggaatt
      121 cgtgcttcta taaacatggg aatagacagc aaagtaagac caaaagtgaa cgtctctcct
      181 tatgtccatt ttatgatgga tttcagaaat caaacaaggg agcaacagcc aaacacctat
      241 tatgatttta ccgaattttc tagaaagtgt tctgaaaagt ggcggaccat ctcaaagaag
      301 gaaaaaaaga agtatgaagc cctggccaag cgcgacaaag atcggtacca acgtgaaatg
      361 agaaactatt ccggaccgag aagggagaga agaaggagag atccagatgc accgcggaag
      421 ccaccatcct cgttcctgct cttctcccag gaccattttg acgaaataaa agaacaacac
      481 ccaaactgga ctgtggcgca ggtggccaag gctgcaggga ggatgtgggc caggtgttca
      541 gaagcggata aaatccccta cgaggagagg gctgcggttc tgagggccaa gtaccttgaa
      601 gagcgggagg cctactacca ccaatgccag cgcggggagt aaaacttcaa gggatggggc
      661 aaacccagtc tgaaacaata aacctcattc aactggc
//
