LOCUS       XM_039100148             927 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to butyrate-induced transcript
            1 (LOC688570), mRNA.
ACCESSION   XM_039100148
VERSION     XM_039100148.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 49% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..927
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..927
                     /gene="LOC688570"
                     /note="similar to butyrate-induced transcript 1; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein, and 51% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:688570"
                     /db_xref="RGD:1587609"
     CDS             1..912
                     /gene="LOC688570"
                     /codon_start=1
                     /product="uncharacterized protein LOC688570"
                     /protein_id="XP_038956076.1"
                     /db_xref="GeneID:688570"
                     /db_xref="RGD:1587609"
                     /translation="MANQRGQWFMQKSECVPAAAVTHVVEVLSLTAASRWRCPMVQQM
                     WQIQPQLGSTGWQRHGTLSSPSLLTTACMSVQPKLSNHGLGVSRRCGGSWRVLWWKLT
                     ALSLPTKAPCHQATEGSRGTWSLNPSTNSSTKLAQAPSLLAWLKENRSPFCCCCTGGS
                     RPYEAQGHSAKGENVYEFHLEFLDLVKPEPAYRLTQRQVNITVQKKGSHWWERLTKQE
                     KRPLFLAPDFDRWLDESDAEMELRAKEEERLNKLRLESEGSPETLTNLKKGYLFMYNL
                     VQLLGFSWIFVNITVRFFILGKDPAGG"
ORIGIN      
        1 atggcgaacc agagagggca gtggttcatg cagaaatctg aatgtgtgcc agctgcagca
       61 gtaactcacg tggtggaagt cctgagtctc acagcagcta gcaggtggcg gtgtccaatg
      121 gtccagcaga tgtggcagat acaaccgcaa ttgggtagta cagggtggca gcggcatggg
      181 actctatcat ctccatcact gctcactaca gcctgcatga gtgtgcaacc caagctgagc
      241 aaccatgggc tgggggtcag caggcgctgt ggtgggagct ggcgggtgct gtggtggaag
      301 ctcacagctc tatccctccc caccaaggct ccatgccacc aagcgacaga gggcagcaga
      361 ggcacatggt ccctcaatcc ttctaccaac tcttctacaa aactcgccca agctccatca
      421 cttttggctt ggctaaaaga gaatcgctca cctttttgct gctgttgtac tgggggtagc
      481 aggccgtatg aagctcaggg acacagtgcc aaaggagaaa atgtctatga atttcacctg
      541 gagttcttag acctcgtgaa gccagagccg gcatacaggc tgacccagag gcaggtgaac
      601 atcacagtcc agaagaaggg gagtcattgg tgggagaggc tcaccaagca ggagaagcgc
      661 ccactgtttt tggcccctga ctttgatcgc tggctggatg aatctgatgc agaaatggag
      721 ctgagagcca aggaggaaga acgcctaaat aaactcagac tagaaagcga aggctcccct
      781 gaaactctta ccaacttgaa gaaagggtac cttttcatgt ataacctcgt gcagctcctg
      841 ggcttctcct ggatctttgt caacatcaca gtgcggttct ttattttggg aaaagatcct
      901 gctggaggct gaccggagca ggcccag
//
