LOCUS       XM_039082870             705 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 40S ribosomal protein S2
            (LOC688473), mRNA.
ACCESSION   XM_039082870
VERSION     XM_039082870.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082870.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..705
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..705
                     /gene="LOC688473"
                     /note="similar to 40S ribosomal protein S2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 91 Proteins, and 92% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:688473"
                     /db_xref="RGD:1588815"
     CDS             40..705
                     /gene="LOC688473"
                     /codon_start=1
                     /product="40S ribosomal protein S2-like"
                     /protein_id="XP_038938798.1"
                     /db_xref="GeneID:688473"
                     /db_xref="RGD:1588815"
                     /translation="MKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQI
                     LAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVWRGYWGNTI
                     GKPHTVPCKVTGHCGSVLMRLIPTPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTAT
                     LGNFAKATFDPISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHTRVSVQRTQAPAV
                     ANT"
ORIGIN      
        1 tggattcccg tcaccaagct gggtcacctg gttaaggaca tgaagatcaa gtccttggag
       61 gagatctacc tgttctccct gcccattaag gagtctgaga ttattgactt tttcctgggt
      121 gcatctctaa aggatgaggt tctgaaaatc atgccagtgc agaagcagat tctggctggc
      181 cagcggacca ggttcaaggc ttttgtcgct attggggact acaatggcca cgttggtctt
      241 ggtgttaagt gctccaagga ggtagccact gccatccgag gggccatcat cctggccaag
      301 ctttctatag tcccagtgtg gagaggctac tgggggaaca cgattggcaa acctcacact
      361 gtgccatgca aggtgacagg ccactgtggc tctgtgctga tgcgcctcat ccccaccccc
      421 agaggcactg gcattgtctc tgctcctgtg cccaagaagc tactgatgat ggccggtata
      481 gatgactgct atacttcagc caggggctgc actgccactc tgggcaactt tgccaaggcc
      541 acctttgacc ctatctccaa gacctacagc tacctgaccc ctgacctctg gaaagagact
      601 gtgttcacca agtctcctta tcaggaattc actgaccatc ttgtgaaaac ccacaccaga
      661 gtctctgttc agaggaccca ggctccagct gtggctaaca cataa
//
