LOCUS       XM_039082624            1649 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Cofilin-1 (Cofilin,
            non-muscle isoform) (LOC688430), mRNA.
ACCESSION   XM_039082624
VERSION     XM_039082624.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082624.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1649
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1649
                     /gene="LOC688430"
                     /note="similar to Cofilin-1 (Cofilin, non-muscle isoform);
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 13 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:688430"
                     /db_xref="RGD:1588858"
     CDS             649..1146
                     /gene="LOC688430"
                     /codon_start=1
                     /product="cofilin-1-like"
                     /protein_id="XP_038938552.1"
                     /db_xref="GeneID:688430"
                     /db_xref="RGD:1588858"
                     /translation="MASGVAVSDGVIKVFNDMKVCKSSMPEVKKHKKTVLFCLSEDKK
                     NIILEEGKEILVGDVGQTVDDPYTTFVKMLPDKDCRYALYDATYETKESKKEDLVFIF
                     WTPESAPLKSKMIYASSKDAIKKKLTGIKHELQANCYEEVKDCCTLAEKLGGRAVISL
                     EGKPL"
ORIGIN      
        1 tgtgaagaga gtgacagtgt actcacatgc ataatataaa taatcttttt aaacaatagg
       61 agatttaaaa taaaaacaaa gttaatcagg agcatatgtg acaaaacatg cccataagac
      121 ctgtagctgg gggatcagga gttaaagcta tcaccaccta tatagcaagt gtgaggccag
      181 tctatttcca aaaagcacag ttgcagaggt gcgtgagata attcagttga gttactaaga
      241 tccacatggt agaggggata actaactact gctagttgtc ctctgatctc cacacgtatg
      301 catgatatgg catgccctcc tctcccacat agcctattat gaaaattttt aaacactcaa
      361 aaattacaaa aaaaggattg aaaatgaaat tgagtgggtt tactatgtat tagacactgc
      421 taaaataaat agtatcccat gtcaaggact agcttctagt gaattgtgtt cctggaacca
      481 aattcatctt gaaaccttgg ctaattttga ctataaggag tagggctcaa tataatacga
      541 gttcctatct tgctttaaaa agtataagta agttcagttg gatcccggca gcagctgcgg
      601 cggctctgtt ctctagctct tttctgtctc ccttttgttt ctggaaacat ggcctctggt
      661 gtggctgtgt ctgatggagt catcaaggtg ttcaatgaca tgaaagtttg caagtcttca
      721 atgccagaag tgaagaaaca caagaagaca gtgctctttt gcctgagtga ggacaagaag
      781 aacatcatcc tggaggaggg caaggagatt ctggtaggag atgtggggca gactgtggat
      841 gacccctaca ccacttttgt caagatgctg ccagacaagg actgccgcta tgctctctat
      901 gacgcaacct atgagaccaa ggagagcaag aaggaggacc tggtattcat cttctggacc
      961 cctgagagtg caccccttaa gagcaaaatg atctatgcca gctccaagga tgccatcaag
     1021 aagaaactga caggaatcaa gcatgaatta caagctaact gctacgagga ggtcaaggac
     1081 tgctgcaccc tggcagagaa actaggtggc agggctgtca tttccctgga gggcaagcct
     1141 ttgtgagcca cctccagccc cttcctggag catctagcag ccccagacct actcttgggt
     1201 gttgcaggct gcccttttcc tgctagattg gaggggctgg gggaattcca gcagggggag
     1261 ggttatccct tctccccagt tgccaaacat ccctcccacc cccctggacc gtccttttcc
     1321 ctccatccct gatggttctg gccttcccaa actgcttttg atcttctgat tcctcttggg
     1381 ttgaagcaga ccaagtccca tcctaggcac ccagtttggg gggagcctgt attttttaac
     1441 gacaccccta ctcctcatcc tcccatccca tgctgccaac ttctaaccat aatagtgact
     1501 ctgtgcttgt ctgtttaatt ctgtgtgtaa atgaactgtg gaaatgaccc tccctgtacc
     1561 agctggttgc cctccccttt cccttgatct tggccactca tggaagcagg accagtaacg
     1621 gaccttcaat ttaaaaaaac aaaaaacaa
//
