LOCUS       NM_001101012            1685 bp    mRNA    linear   ROD 17-MAY-2024
DEFINITION  Rattus norvegicus olfactory receptor family 2 subfamily N member 1E
            like 1 (Or2n1el1), transcript variant 1, mRNA.
ACCESSION   NM_001101012 XM_001073302
VERSION     NM_001101012.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1685)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1685)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC128716.1.
            
            On Aug 13, 2007 this sequence version replaced XM_001073302.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC128716.1, CK473536.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on manual assertion, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1685
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="20"
                     /map="20p12"
     gene            1..1685
                     /gene="Or2n1el1"
                     /note="olfactory receptor family 2 subfamily N member 1E
                     like 1"
                     /db_xref="GeneID:686288"
                     /db_xref="RGD:1584276"
     exon            1..28
                     /gene="Or2n1el1"
                     /inference="alignment:Splign:2.1.0"
     exon            29..186
                     /gene="Or2n1el1"
                     /inference="alignment:Splign:2.1.0"
     exon            187..357
                     /gene="Or2n1el1"
                     /inference="alignment:Splign:2.1.0"
     exon            358..410
                     /gene="Or2n1el1"
                     /inference="alignment:Splign:2.1.0"
     exon            411..462
                     /gene="Or2n1el1"
                     /inference="alignment:Splign:2.1.0"
     exon            463..1651
                     /gene="Or2n1el1"
                     /inference="alignment:Splign:2.1.0"
     CDS             483..1421
                     /gene="Or2n1el1"
                     /note="olfactory receptor Olr1668-like"
                     /codon_start=1
                     /product="olfactory receptor family 2 subfamily N member
                     1E like 1"
                     /protein_id="NP_001094482.1"
                     /db_xref="GeneID:686288"
                     /db_xref="RGD:1584276"
                     /translation="MAVSNESHPKEFILLGFANHPWLELPLFVTLLITYPMALMGNIA
                     IILVSTLDPRLHSPMYFFLTNLSFLDMCYTTSLVPQMLFNLGSSRKTISYVGCVIQLY
                     VFHIMGGTECLLLAIMSIDRYVAICRPLHYTLIMSQRVCVLSVSIMWLTGVIFAFSEA
                     TLTLQLPLCGQYKLDHLLCEIPVLIKTACGEKEFNELALSVVCIFILAVPLCLILASY
                     VNIGRAVLRIKSSEGRKKAFGTCSSHLIVVSLFYGPAISMYLQPSSSITRDQPKFMAL
                     FYAVITPTLNPFIYTLRNKDVKGALKKLLRSIFSSK"
ORIGIN      
        1 gtgaatgaga gagcatgaag gagaaaatat ttttacacgc tgggttacat cgatggattt
       61 ccctatattg aaccatcccg gcatccctgg gatggaggca gcttgatcat ggtagaggat
      121 gtttttttgt gtgtgctctc ggatctgttt gtgaatattg agtatttttg cattaatgtt
      181 tataaggtgt gaagcacctg tcatagtagc ctaaatctac taggagggat tatttaaata
      241 aagagttaag acggtatgga agtgagagaa taatttacta attcatccac taaaattact
      301 gaaatgctca tttactaatc agtccgtggt cttacactac cagatcatgt tcttaaggaa
      361 tttgagactg ctattctatt tctgtgaaga aggtcattgg aactgaatgg tctggtagtc
      421 tctgcctttt aattggaaga ttgagattat taattctgaa aggtaaaata tatcaaagaa
      481 gaatggctgt atccaatgaa agccacccaa aagaattcat cctcctgggc tttgctaacc
      541 acccttggct ggaactcccg ctctttgtta ctctgctgat cacgtacccc atggctttga
      601 tggggaacat cgccatcatt ctggtgtcca ccttggatcc tcgtctccac agccccatgt
      661 atttctttct cacaaatctc tcctttctgg acatgtgcta caccacaagc cttgtgcctc
      721 agatgctgtt taacctggga agctccagaa aaaccatcag ttacgttgga tgtgttatcc
      781 aactctatgt cttccacata atgggaggca cggaatgtct gcttttggct atcatgtcca
      841 ttgatcgcta cgtggctatc tgcagacctc tccactacac cctcatcatg agtcagcgag
      901 tgtgcgtctt gtcagtgtct atcatgtggc tgactggagt gatcttcgct ttttcggagg
      961 ctacacttac attacaattg ccattgtgtg gccaatataa actggatcac ttattgtgtg
     1021 aaatccccgt tctcataaaa actgcctgtg gggaaaagga gtttaatgag ctggcacttt
     1081 ctgtggtgtg cattttcata ctggctgttc ctctgtgctt aattcttgct tcttatgtta
     1141 atattggtcg tgcagtactt agaattaaat cttctgaagg aaggaagaaa gcctttggga
     1201 catgttcttc tcatctcatt gtagtttctt tattttatgg tccagccatt agcatgtacc
     1261 ttcagccttc ttcctccatc acaagggacc aacccaagtt catggctctc ttttatgcag
     1321 tgataactcc tacactgaac cccttcatct ataccttaag gaacaaggat gtaaagggtg
     1381 ccttaaaaaa gctactgaga agcatcttca gttcaaagtg aaagttgttt ggcattaaaa
     1441 ctaataattt tataataatt atattgtaat aattttatat tgatttctct aataatggtc
     1501 atatattcca ggtccacaga ttacggcctt cttgccaggt ttttctcatt tctagtatca
     1561 gagcattgtg agttttgttt atgaattagg atgaagtgtt tgacatttaa ataaagaatt
     1621 tcatgatata ttaaaatata caagcaggca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1681 aaaaa
//
