LOCUS       XM_006254133            1235 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus ral guanine nucleotide dissociation
            stimulator like 8 (Ralgdsl8), transcript variant X1, mRNA.
ACCESSION   XM_006254133
VERSION     XM_006254133.4
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086035) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_006254133.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1235
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..1235
                     /gene="Ralgdsl8"
                     /note="ral guanine nucleotide dissociation stimulator like
                     8; Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 39 long SRA reads"
                     /db_xref="GeneID:686142"
                     /db_xref="RGD:1585457"
     CDS             80..889
                     /gene="Ralgdsl8"
                     /codon_start=1
                     /product="ral guanine nucleotide dissociation
                     stimulator-like isoform X1"
                     /protein_id="XP_006254195.2"
                     /db_xref="GeneID:686142"
                     /db_xref="RGD:1585457"
                     /translation="MFSCCPWTTEGSGLKKDKNEGQVGTLKFMILSCLQCLWPFAQKE
                     TDLTQENQTQDYADEGEHECAPMVVTEPCTETHISTNMVENLVNRLVSSLQDGDLFFA
                     PAFLNAYRQFTTTQYALDLLLKRFAYFYLDCEEDKHIKSTLCCFLDTWIDQYPEEFSQ
                     TILKKLKTYLTVNMPSSDLNVRVHMLLKELRQESNESEGKGEDSVSLPVTLLYKTESA
                     ADLSSSVEVRSYTSGDLEMEAWFPSGNVQPEPAYLQETETPESTIKVISWD"
     polyA_site      1235
                     /gene="Ralgdsl8"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aaaatcctga tgaccaggca gccaactgct tacacacagc ccagcaggct cacttgtcca
       61 agagcttaga gagagcagga tgttctcttg ttgtccttgg actactgaag gctcaggcct
      121 gaagaaagat aaaaatgaag gtcaggtagg gaccttgaaa ttcatgattc tttcctgcct
      181 gcaatgtctc tggccatttg cccagaagga aacagacttg acccaagaaa accagaccca
      241 ggactacgca gacgagggtg agcatgagtg tgccccaatg gtcgtgacgg agccctgtac
      301 agagacacat atcagtacaa acatggtgga aaatctggtg aatcgactgg tgtcatctct
      361 gcaggatggg gacctcttct ttgcccctgc tttcctgaac gcataccgac agttcaccac
      421 cacacagtat gcgctggatc tgctgttgaa gaggtttgcc tacttctacc tggattgtga
      481 agaggataaa cacataaaga gcactctctg ttgcttcctg gacacatgga tagaccaata
      541 ccctgaggag tttagtcaga ccattctgaa aaagttgaag acctacttga ctgtgaacat
      601 gccctcctcc gatctgaatg tccgtgtcca tatgctcctc aaggagttgc ggcaagagtc
      661 caatgagtca gagggaaaag gtgaagactc agtttcactg cccgttaccc ttctctacaa
      721 gactgaatcg gctgcagatt tgtcttcatc tgtagaagtg aggagctaca cctctggaga
      781 tttagagatg gaagcgtggt ttccatcagg gaacgtgcag ccagaaccag cttatctgca
      841 agagacagag accccagaat ccaccataaa ggtcatctct tgggactaga tgggacagca
      901 gcagcccagc cagcatacgg gctagcagct gtggaacctg tgtctcaccg tgtcagccga
      961 cacaatgtcc ttcttgcatc ttctcccctt ctcgaccttg tcctatctcc ttagagaatg
     1021 accctgtcat tatcacctga ggggtctctt atatctgctc tgcagacagc acctgtctga
     1081 cgtactggca gaaccattcc ctgatttcaa tatagcaact tcccttgccc cacagccagc
     1141 cctcacctcc ccctgagaaa tggccttttt acttctgtgg ttctttttat gttgtttttc
     1201 ttttaagtat ttgttttaat aaattgttag tactc
//
