LOCUS       XM_039106781             948 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to 60S ribosomal protein L38
            (LOC686066), mRNA.
ACCESSION   XM_039106781
VERSION     XM_039106781.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039106781.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..948
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..948
                     /gene="LOC686066"
                     /note="similar to 60S ribosomal protein L38; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 20 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:686066"
                     /db_xref="RGD:1586630"
     CDS             669..875
                     /gene="LOC686066"
                     /codon_start=1
                     /product="60S ribosomal protein L38-like"
                     /protein_id="XP_038962709.1"
                     /db_xref="GeneID:686066"
                     /db_xref="RGD:1586630"
                     /translation="MPRKIEEIKDFLLTARQKDATSVKIKKNKGNVKFKVHCSRYLYT
                     LVITDNEKKMKQSLPPGLAVKELK"
ORIGIN      
        1 tctgatgtcc tctgtcctct tctggtgtgt ctgaagacag agacagtgta cttatatata
       61 ataaataaaa tcttaaaaaa aaaaaagaat tccaggatgc tagggggagt gggtggggtt
      121 gggccacccg ggccctgagg gaatgaatag ccagctggtg gtgaggatag ggaaagctct
      181 gaggataagt aagtaatgta ggaatcattt atttttgttt gttttttgtt tgaggcaggg
      241 tctcactgtg taactttggc tggcctggga ctcattatgt agacgttttg caggctgatc
      301 tggaacttac tgaaatctgg ctgcctctgc ctcccaagtg ctaagactaa agatgtggat
      361 tgccacaccc acttgtcttt gctatctttt taagatttat ttattattta tatgagtaca
      421 ctgtagctgt cttcagacac atcagaagag ggaatcagat cccattacag gtggttgtga
      481 gccaccatgt ggttgctgga atttgaactc aggacctctg gaaaagcaat tggtgctctt
      541 aaccactgag ccatctctcc agtctgctat tttttaatta tataaaacat ttaaaatccg
      601 aagcaatcca tagccggatt gggtttgggg agcacgggtg ctgacaccag agccgagtgc
      661 ctgtcgccat gcctcggaaa attgaggaaa tcaaggactt tctactcaca gcccggcaga
      721 aggatgccac atctgtcaag atcaagaaaa acaagggtaa tgtaaagttc aaggtccact
      781 gtagcaggta cctctacacc ctggttatca cagacaatga gaagaagatg aagcagtccc
      841 tgcccccagg tttggcagtg aaggagctga aatgaaccgg acctctgcat gtgactatta
      901 aaaaccctga aaagtaaaaa aaaaaaaaaa aaaaaaccaa aaaaccaa
//
