LOCUS       XM_039098109            1833 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical protein LOC685989
            (LOC685989), transcript variant X1, mRNA.
ACCESSION   XM_039098109
VERSION     XM_039098109.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1833
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1833
                     /gene="LOC685989"
                     /note="hypothetical protein LOC685989; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 13 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     4 samples with support for all annotated introns"
                     /db_xref="GeneID:685989"
                     /db_xref="RGD:1587786"
     CDS             749..1360
                     /gene="LOC685989"
                     /codon_start=1
                     /product="disks large homolog 5-like isoform X1"
                     /protein_id="XP_038954037.1"
                     /db_xref="GeneID:685989"
                     /db_xref="RGD:1587786"
                     /translation="MFARLCRRFGRVDVDREESRVKQTKPKGNDGHRTWGMWKACRQT
                     SSPENVLNKVQANEEEERLNRELELTTKERNELTDRLLYVTGGSMSKSPYFRPNPFYE
                     NLKIKEKEVMSLLHNLDTKNIEHREKFQELKKEINFYRNLHSRLLMDQACMKKKLVTL
                     KQESKELQRYLFELNPNDEDEQEKTSNLQTQQNVVSETAGDMA"
ORIGIN      
        1 acctggaaaa aatacattct caatatgatc ccagattggc catggaaaaa gggtagcttg
       61 aactgtccca cctaggttct gggcctgcac aggcctgctc tccaacagaa acctgtgttc
      121 acagctgcag gctgcattca ctatgggtgt ccttgaggtt cttccctaaa ctgcttagat
      181 taaaataatt ttcatgctaa caatcaaaaa actcattatg ccaatctggc caacaggaag
      241 ctaatttcta ttctgtattt tgtcagatgt gcagaataca tatggtcatc attgataata
      301 ggtgaaagat ctgctctaat atggacacta agtggtgctg gaggatgatc ctgacccaca
      361 atgagcagtg ggaacaccag agccctgtag ggatggctgg caagctaaca cattgagcat
      421 gcacagctca gtaaatttcc tgtgaataca catctcctga gatctctcta tttaattgga
      481 ggtgatcctg tccacctaat acagcacatc atgtggaata acaaaagcac ctgcaggagc
      541 tgtggtgatg actcacagga tagagcatct gctgctctct cagaagaacc acatggaccc
      601 taacaattgg gtgcttccta cacaagaagt cacatgacca cagagtgtca tttgtcaaag
      661 aaccaagaac ttgttcaaaa ctctacagag catccaatct atcacgtgga tatgcaataa
      721 tgagtgtcca aaggatatat ccacagacat gtttgcccgt ctttgtaggc gctttgggag
      781 agttgatgtt gatagagaag agtctagagt gaagcaaacg aaacctaaag gtaatgatgg
      841 acacaggaca tggggaatgt ggaaggcctg cagacagacg tcatcccctg aaaatgtcct
      901 aaacaaggtg caggccaacg aggaagagga gaggctgaat agagaactgg agctaactac
      961 caaggagaga aatgagctga cagatcgcct cctttatgtg acaggtggat ccatgagcaa
     1021 gagcccctac ttcaggccaa atccatttta tgaaaacttg aagataaagg agaaagaggt
     1081 catgtcatta ctgcacaact tagacacaaa gaacattgaa catcgtgaga aatttcagga
     1141 gctcaagaag gagattaact tctatcgcaa cctgcacagc cggctcctga tggaccaggc
     1201 atgtatgaag aagaagttgg tcacattgaa gcaggagagc aaggagttac agcgatattt
     1261 gtttgagttg aacccgaatg atgaagacga acaggagaag accagcaacc tccagaccca
     1321 gcaaaatgtg gtctcagaaa ctgcaggaga catggcatag gacggatccc aggaagacag
     1381 ccccctgagg aatgagtttc tctctcagga gttccctgtg acgacaatcc tcacagtcaa
     1441 agactttttg ggggaatatt cttcttctca gataatttcc tcaatgtata gagaccctaa
     1501 atttatgtat ccgtatgcca gcctgtctgg ttgaggtctt tctcctttct cataccgaca
     1561 acaccatttg agagacaact gaggggactg ccttgacatc tcacgtccta gaggagaaac
     1621 agcactacaa ctgtgtttct aaatgttcat taagaaaatg ctgttaagaa atgtttttgg
     1681 ttatgatttt cattgaagtt ttctttttgt tatttcatag ttatatattc ttgttactgt
     1741 ttttcatttt ttataccatt ttagttgttc attttatgcc tgttttttgt aaattgtatt
     1801 ccttatgaat aaaaattgat ttgtaactct tga
//
