LOCUS       XM_039100327            1362 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to interferon stimulated
            exonuclease gene 20-like 2 (LOC685776), mRNA.
ACCESSION   XM_039100327
VERSION     XM_039100327.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100327.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1362
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1362
                     /gene="LOC685776"
                     /note="similar to interferon stimulated exonuclease gene
                     20-like 2; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:685776"
                     /db_xref="RGD:1590192"
     CDS             202..1275
                     /gene="LOC685776"
                     /codon_start=1
                     /product="interferon-stimulated 20 kDa exonuclease-like 2"
                     /protein_id="XP_038956255.1"
                     /db_xref="GeneID:685776"
                     /db_xref="RGD:1590192"
                     /translation="MSTILLNLDFGEPSKKAFGGNAKHQRFVKKRRFLEQKGFLSKKN
                     QPPSKVSKLNSEPPKKGETSRVDSISKILSCLKKKKEAAASKRDSEQSKDKKASLSWL
                     TPAPSKKTDSVVAKIDLLGELQSALPKPKRRTQKKGSKKPLKKKIATENSTQTQSKDK
                     GSNRKPLKKNAVQNSTQAQPEDKCPKVPQSLPRKMVAIDCEMVGTGPKGRVSSLAHCS
                     IVNYNGDVLYDEYICPPCYIVDYRTRWSGIRKCHMVNATPFKTARSQILKILSGKVVV
                     GHAIHNDYKALQYFHPKSLTRDTSQIPLLNRKADCPENVTLSLKHLTKKLLSRDIQTG
                     LSGHSSVEDAQATLELYKLVEVE"
ORIGIN      
        1 gcatccggct ccagatgctt gcgattttag tgggacctaa cttggaggcc tatggtgcaa
       61 gtatcaggat tacttttgcc cccaaggcta attgcagatc tcctcatgtt gaactatggg
      121 attccacaga gaatgagact ctcatccttt ttccatcagt gagccactct tcccagcttt
      181 ctcccaccat ccactgacct catgtctacc atactcctga atttggactt tggggaacct
      241 tcgaaaaagg catttggagg aaatgccaaa catcaacgtt ttgtcaagaa gcgaaggttc
      301 ttggaacaga aaggatttct gagtaaaaag aaccaacccc ctagcaaggt gtctaaatta
      361 aactcagaac ctccaaagaa aggggaaact tcaagagtag atagcatttc gaagatcctt
      421 tcatgcctaa agaagaagaa agaggcagct gcatccaaga gggactccga acagtccaaa
      481 gacaagaaag catcattgtc atggctgacc cctgctcctt caaagaagac tgattctgtt
      541 gtggctaaaa tagatttgct tggggagttg cagagtgccc ttccaaagcc taagagacgc
      601 acccagaaga agggctctaa gaagcccttg aaaaagaaaa ttgctacaga aaactccacc
      661 caaactcagt caaaggataa aggctccaac aggaagccct tgaagaaaaa tgctgtacag
      721 aactccaccc aagctcaacc agaggataag tgccctaaag tccctcaaag cttgccaagg
      781 aagatggtgg caatagactg tgaaatggtg ggcacgggac ccaaggggcg tgtgagttcc
      841 ttggctcact gcagcatcgt gaattacaat ggagatgtgc tttatgatga gtacatctgc
      901 cccccatgct atatcgtgga ctaccggacc aggtggagtg gcatccggaa gtgccacatg
      961 gttaatgcta ccccctttaa gactgctcgg agtcagatct tgaagatact ctcagggaag
     1021 gtagtggtag gacatgccat tcataatgac tacaaagccc tacagtactt tcatcccaag
     1081 tccctcactc gagacacttc ccaaataccg ctcctcaacc ggaaggctga ctgcccagaa
     1141 aatgtcactt tgtcactgaa gcatctcacc aagaagctgc tgagtcggga catccagact
     1201 ggactaagtg gacattcctc ggtggaagat gcccaggcca cattggagct gtacaagttg
     1261 gttgaagttg aataggaaca gcatctggcc cagaatcctc cagaaaatta gcagtcccag
     1321 ggagacacat gcagtagacc aacccacagt actgccagct tc
//
