LOCUS       XM_039084433            1809 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical protein LOC685668
            (LOC685668), transcript variant X1, mRNA.
ACCESSION   XM_039084433
VERSION     XM_039084433.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051344.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1809
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1809
                     /gene="LOC685668"
                     /note="hypothetical protein LOC685668; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 EST, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 6 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:685668"
                     /db_xref="RGD:1591345"
     CDS             213..1022
                     /gene="LOC685668"
                     /codon_start=1
                     /product="girdin isoform X1"
                     /protein_id="XP_038940361.1"
                     /db_xref="GeneID:685668"
                     /db_xref="RGD:1591345"
                     /translation="MTAAGFPTETTASQCPRKKPRPALPGDLEAWSSRRPLARPPVWS
                     PGTASSKQQAGRAAAPEQQNQGMFRQLLRLFRKESVDQGETTPGQREAEPLSSETGRR
                     KSFWGRLGFGRKASSQNVISKQEECLKELEELKFEIQKCQFERDELYQILDLYIYDEW
                     DHRLHVELPVLQSEHEMRMMAMQMMTNSISDAMERYKELIQVNSSYRIRHSQLLREKT
                     QLKNNIQILLNEKSELLVEQTELPASSVEAKRLCEEAGMNIYDPRAKQQQV"
ORIGIN      
        1 aagttgactc ctctctctcc ctctccgacc ccggcagggc ccagaggtga ttctgcctcc
       61 acgatgtcct ccttgctgga ggcgagctct tcgcaggcgc cacatcgcca gcaaaaagag
      121 aaagaaaaaa agaaaagaaa aagcagaagg agaggccagg gaagggggcc ttagcggcgt
      181 tgggcatcat ctcggccacg ggagggcgcc ctatgacagc ggcggggttt ccaacagaga
      241 ctacagcctc gcagtgtcca aggaagaagc ccaggccagc cctgccaggg gaccttgagg
      301 catggagctc gcgcagaccc ctagcccgac ctccggtctg gtccccagga acagcaagca
      361 gcaagcagca agcagggcgg gctgcagccc cagagcagca gaatcaaggc atgtttcgcc
      421 agctgctcag gctatttcgg aaggaaagtg ttgatcaagg agaaaccaca ccaggtcaga
      481 gggaagctga acccctctcg agtgaaacag gaaggaggaa atcattctgg ggaaggcttg
      541 gttttggtag gaaggcatca tcccaaaatg tcatcagtaa gcaagaggag tgtctaaagg
      601 aactggagga actcaaattt gaaatccaga agtgtcaatt cgagagggat gaactttatc
      661 aaatcctgga tctttatatc tatgatgagt gggaccacag gctgcatgtc gaattgccag
      721 tccttcaatc cgaacatgag atgagaatga tggctatgca aatgatgacc aactcaataa
      781 gtgatgccat ggagaggtac aaggagctca tacaagtgaa cagttcctac cgcatcaggc
      841 actcccagct cctgcgtgaa aaaactcaat tgaagaacaa tatacagatt ttgctgaatg
      901 agaagagcga actgctggtg gagcagactg aactgccagc atcctctgtg gaggcaaaga
      961 ggctctgtga agaggccgga atgaacatct atgaccccag agccaagcaa cagcaggtct
     1021 gaaattctcc agcagaaact cgaacatgac acagaccagg acaagatctc ccttggagag
     1081 aagagcttcg ggaggagaac taagtgtgca caacaaatac accactattg cgtctcatct
     1141 gtaatgtcca tagcaattgt agactgcatt ttcctccttt cgtttaactt ctttggattg
     1201 aataggcttt actttcacct cagctctctc cagcaagtgt aaacttttgg atggacccag
     1261 agaagtgttg atgcacatca atcaagagct gctggtcatc cagaaagact gtgcacgtgt
     1321 aaatttgtac ttgtcctgat gggtcatcca gaagagtttc atggagatca gttcacaaca
     1381 ttggaaagac tatgaaacaa agtctgtaat atcatttata ctcagtattg ataggttttg
     1441 tccttaatac ccccactcca acaaaacaga cctacttcca ctcctcttga aaagattatt
     1501 accatcagta actgcttgtc tactatgtct ccaaggcaag ccacaggcta taagtctatt
     1561 ctgcaaaagg agcagcaaaa gaatgcttag cacaattcct ttatttaacg tttggtttag
     1621 ttttgattgt tttggttatt tggttttcct tctattcatt tgaaatttta ttacttatgt
     1681 gtttttgttt tgttcatttg cttttctatt ttgataagga tatagactgt atatattgac
     1741 tacctgcatc tggttactat tcagtaaatt ggatgtattc tggtgaataa aggggtaatc
     1801 tcaaatctt
//
