LOCUS       XM_008770407            1476 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to CG7638-PA (LOC685655),
            mRNA.
ACCESSION   XM_008770407
VERSION     XM_008770407.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; corrected model.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008770407.4.
            
            On Jan 21, 2021 this sequence version replaced XM_008770407.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            internal stop codons :: corrected 1 genomic stop codon
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1476
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1476
                     /gene="LOC685655"
                     /note="similar to CG7638-PA; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 2
                     ESTs, 3 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:685655"
                     /db_xref="RGD:1591358"
     CDS             292..1374
                     /gene="LOC685655"
                     /note="The sequence of the model RefSeq protein was
                     modified relative to its source genomic sequence to
                     represent the inferred CDS: substituted 1 base at 1
                     genomic stop codon"
                     /codon_start=1
                     /transl_except=(pos:1006..1008,aa:OTHER)
                     /product="LOW QUALITY PROTEIN: transmembrane protein
                     161B-like"
                     /protein_id="XP_008768629.3"
                     /db_xref="GeneID:685655"
                     /db_xref="RGD:1591358"
                     /translation="MKPTQEMNISLVWCLLVLSFAIKVLFSLTTHYFKVEDGGERSVC
                     VTFGFFFFVKAMAVLIVTENYLEFGLETGFTNFSDTAMQFLEKQGLESQGPVSKLTFK
                     FFLAVFCSLIGAFLTFPGLRLAQMHLDALNLATEKITQTLLHINFLAPLFMVLLWVKP
                     ITKDYIMNPPLGKESVPLMTEATFDTLRLWLIVLLCVLRLAMLRSHLQAYLNLAQKCV
                     DQMKKEAGRISTVELQKMVAXVFYYLCVIALQYVAPLVMLLHMTLLLKTLGNHSWGIY
                     PEAVSPLPVDNNLPSNLVYPELPSPDGKMKVTVTQITVALSSLKNIFTPLLFRGLLSF
                     LTWWIAACLFSTSLFGLFYHQYLTVA"
ORIGIN      
        1 aataacagga gtcaactctt gagatggtat caacaccctt ccgaagaaga attaagaatc
       61 cttgcaggga agcagcagaa aggaaaaagt aaaaaagaca gaaaatacaa tggccatatt
      121 gaaaataagc cactgaccat tccaaaagac attgaccttc atctagaaac caagtccatt
      181 acagaagtgg atactttagc actgcattac tttccagaat accagtggct ggtggacttc
      241 acggtggctg ctactgttgt gtatttagta actgaagtct attacagctt tatgaagccc
      301 acacaggaaa tgaatatcag cttagtctgg tgcctcctgg ttttgtcttt tgcaatcaaa
      361 gttctatttt cattaactac acactatttt aaagtagaag atggaggtga gaggtcagtt
      421 tgtgtcacct ttggattttt tttcttcgtt aaagcaatgg cagttttgat cgtaacagag
      481 aactacctgg agtttggact tgaaacaggg tttacaaatt tttcagacac tgcgatgcag
      541 tttcttgaaa agcaaggttt agaatctcag ggtcctgttt caaaacttac tttcaaattt
      601 ttcctggctg ttttctgttc actcattggg gcttttttga catttcctgg attacggctg
      661 gctcaaatgc atctggatgc cctgaatttg gcaacagaaa aaattacaca aacattactt
      721 catatcaact tcttggcacc tttatttatg gttctgctct gggtgaaacc aatcaccaaa
      781 gactacatca tgaacccacc attgggtaaa gagagtgtcc ctttaatgac agaagccaca
      841 ttcgatactc ttcgactctg gttaatagtt ctgctatgtg ttttgcggtt ggccatgttg
      901 cgaagtcact tgcaagcgta tttaaacttg gcccagaaat gtgtggatca aatgaagaaa
      961 gaagcaggcc gaataagtac agtggagcta cagaaaatgg tagcatgagt cttttattac
     1021 ctgtgtgtca ttgccctgca atatgtggca cctctggtga tgctgcttca catgactctg
     1081 cttctgaaaa cactaggtaa tcattcctgg gggatttatc cagaagctgt ctctcccttg
     1141 ccagtggata ataatctccc atccaacttg gtttaccctg aactaccatc acctgatggg
     1201 aagatgaagg taactgttac gcaaatcaca gtggcgttga gcagcttaaa aaacatcttc
     1261 acgcctctcc tttttcgagg acttctgtca tttttgacat ggtggattgc tgcttgcctc
     1321 ttttctacaa gcctttttgg gcttttctat catcagtatc tgacagtggc atgaatttca
     1381 gtcaaaaatg gatatccaag tcacacttta aattcaaata tctgtgccct tgaaggttga
     1441 caaaagaaga atgcaaatac aacggagaaa aacgta
//
