LOCUS       XM_039111545             567 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Histidine triad
            nucleotide-binding protein 1 (Adenosine 5-monophosphoramidase)
            (Protein kinase C inhibitor 1) (Protein kinase C-interacting
            protein 1) (PKCI-1) (LOC685311), mRNA.
ACCESSION   XM_039111545
VERSION     XM_039111545.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039111545.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..567
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..567
                     /gene="LOC685311"
                     /note="similar to Histidine triad nucleotide-binding
                     protein 1 (Adenosine 5-monophosphoramidase) (Protein
                     kinase C inhibitor 1) (Protein kinase C-interacting
                     protein 1) (PKCI-1); Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 1 long SRA read, 8
                     Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:685311"
                     /db_xref="RGD:1595137"
     CDS             49..417
                     /gene="LOC685311"
                     /codon_start=1
                     /product="histidine triad nucleotide-binding protein
                     1-like"
                     /protein_id="XP_038967473.1"
                     /db_xref="GeneID:685311"
                     /db_xref="RGD:1595137"
                     /translation="MADEIAKAQVAQPGGDTIFGKIIRKEILAKIIFEDDRCLAFHDI
                     SSQAPRHFLVIPKKHISQVSVADDDDESLLGHLMIVGKKCAADLGLKRGYRMVANEGA
                     DEGWGQSVYHTSSMSLEVGR"
ORIGIN      
        1 cctctcccca ccgtggccgc ggcgcgggaa gaacagcgac tggcggcgat ggctgacgag
       61 attgccaagg ctcaagtggc ccagcccggt ggcgacacga tcttcggcaa gatcatccgc
      121 aaagaaatcc tggccaagat cattttcgag gacgatcggt gtcttgcttt tcatgacatt
      181 tcctctcaag caccaagaca ctttctggtg atacccaaga agcacatatc ccaggtttct
      241 gtggcagatg atgatgatga aagtcttcta ggacatttaa tgattgttgg caagaaatgt
      301 gctgcggatc tgggcctgaa gcgcgggtat cggatggtgg cgaatgaagg tgcagacgag
      361 gggtgggggc agtctgtcta tcatacttcc tccatgtcct tggaggtcgg cagatgaact
      421 ggcctcctgg ttaagcaggt tggggataag tatccttctc taggtagttg acaagctcca
      481 gtaatttcaa tggcacacat agttttgcct gtgtatggag agattgaaga gatcatttaa
      541 aattctgtgc ctaataaaag acattgt
//
