LOCUS       XM_039098105            1169 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to spermatogenesis associated
            glutamate (E)-rich protein 4b (LOC685291), transcript variant X3,
            mRNA.
ACCESSION   XM_039098105
VERSION     XM_039098105.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1169
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1169
                     /gene="LOC685291"
                     /note="similar to spermatogenesis associated glutamate
                     (E)-rich protein 4b; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 ESTs, 6 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 3 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:685291"
                     /db_xref="RGD:1596406"
     CDS             74..691
                     /gene="LOC685291"
                     /codon_start=1
                     /product="disks large homolog 5-like isoform X3"
                     /protein_id="XP_038954033.1"
                     /db_xref="GeneID:685291"
                     /db_xref="RGD:1596406"
                     /translation="MFARLRRRFGRVDVDGEESRVKQTKPKSNDGHRTWSCGMWKACR
                     QTSSHETVLNKVQANEEEERLNRELELTTKERNELTDRLLYVTGGSMNKSPYFRPNPF
                     YEKLKIKEKEVMSLLHNLDTNNIEHREKFQELKKEINFYRNMHSQLLMDQACMKKKVV
                     TLKQECKEVQRYLFELNPNDEEEREKTSNLQTQQNLVSETTGDME"
ORIGIN      
        1 tgtcaccagt gttgtagtga caaccagttc cctaactttt ctctcttagt gtccaaagga
       61 tatatccaca ggcatgtttg cccgtcttcg caggcgcttt gggagagttg atgttgatgg
      121 agaagagtct agagtgaagc aaacaaaacc taaaagtaat gatggacaca ggacatggtc
      181 atgtggaatg tggaaggcct gcagacagac gtcatcccat gaaactgtcc taaacaaggt
      241 gcaggccaac gaggaagagg agaggctgaa tagagagctc gagctaacta ccaaggagag
      301 aaatgagctg acagatcgcc tcctttatgt gacaggtgga tccatgaaca agagccccta
      361 cttcaggcca aatccatttt atgaaaaatt gaagataaag gagaaagagg tcatgtcatt
      421 actgcacaac ttagacacaa acaacattga acatcgtgag aaatttcagg agctcaagaa
      481 ggagattaac ttctatcgca acatgcacag ccagctcctg atggaccagg catgtatgaa
      541 gaagaaggtg gtcacattga agcaggagtg caaggaggta cagcgatatt tgtttgagtt
      601 gaacccgaat gatgaagaag aacgggagaa gaccagcaac ctccagaccc agcaaaattt
      661 ggtctcagaa actacaggag acatggaata ggacagatcc caggaagaca gccccctgaa
      721 gaatgagttt ctttctcagg agttccctgc tgacgacaat cctcaacagt caaagacttt
      781 tttgggggga atattcttct tctcagataa tttcctcaat gtatagagac cctaaattta
      841 tgtatccgta tgccagcctg tctccttgag gtctttctcc tttctcatac cgacaacacc
      901 atttgagaga caactgaggg gactgccttg acatctcgtg tcctagagga gaaacagcac
      961 tacaactgtg tttctaaatg ttcattaaga aaatgctgtt aagcaatact tttggttatg
     1021 attttcattg aagttttctt tttgttgttt catagttata tattcttgtt actgtttttc
     1081 atttttgata ccattttagt tgttcatttt atgcctgttt ttttttgtaa attgtattcc
     1141 ttatgaataa aaattgattt gtaactctt
//
