LOCUS       XM_039090033             955 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to paired immunoglobin-like
            type 2 receptor beta (LOC685275), transcript variant X1, mRNA.
ACCESSION   XM_039090033
VERSION     XM_039090033.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051347.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..955
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..955
                     /gene="LOC685275"
                     /note="similar to paired immunoglobin-like type 2 receptor
                     beta; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 45 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:685275"
                     /db_xref="RGD:1596422"
     CDS             450..704
                     /gene="LOC685275"
                     /codon_start=1
                     /product="uncharacterized protein LOC685275 isoform X1"
                     /protein_id="XP_038945961.1"
                     /db_xref="GeneID:685275"
                     /db_xref="RGD:1596422"
                     /translation="MSAHCSHYYPREPLHHPLCSPHSWPGDTRGQRNPSLLNLGAMVG
                     MVMAKVVVIIPLYGWMIFLWWKQRLPSARISHQGGKFTSK"
ORIGIN      
        1 aaatatagag gaaaggggca cagtgattat aagccactta ggaaatggaa tagtgtagat
       61 gagatagatg gttaaggtgg aagagaggag aaccagctat gccaagggct aggatatgtc
      121 tcccagccaa acgtgggggc tgggcccaag agccctgtca tgttgtcagt aaccacaagg
      181 gtggatcttt tgcaaaagca gaagagcaga agccagatca gtaaaggaag ttgctggcca
      241 caaggaggtg gagattgtcc tgctcaattc agtcttcccc ttgagaatgt ctgagcatgt
      301 gtttttattt accctgattc tctcgggact gctgagtgcc ccagtgtccc tagacagggc
      361 aacctcgact tcctgacggc cctgctggtc tcacttcctg aacagaatct ggctatggct
      421 cggatcctcc ttcttttgct gttggcagca tgtctgcaca ctgctctcac tactacccca
      481 gggagcccct ccatcatccc ctctgcagtc cccacagctg gcctggggac acaaggggcc
      541 agaggaatcc ttcactgctg aacctgggag ccatggttgg gatggtcatg gccaaagttg
      601 tggtcatcat ccccctctat ggatggatga tcttcctgtg gtggaagcaa aggctcccca
      661 gtgctaggat ctctcaccag ggaggcaagt tcacatcaaa gtaggtgttg gtgatcacac
      721 accctgcatt ccacagcctt ccatgtcttc tcgctgggag tcagagctcg tggctgcagg
      781 attctcctgt gaaaatcacc attctttaat tacccccact tctgccatgg gggcgtggat
      841 accctctcct tggaatcaag gtcctcctgt gtgtctctgg gcctgagagc ctgactgtgc
      901 tgttgtctct ctgctcatgg agttattgac actgttaata aataccttac tccca
//
