LOCUS       XM_039098184             813 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to spermatogenesis associated
            glutamate (E)-rich protein 4d (LOC685226), transcript variant X1,
            mRNA.
ACCESSION   XM_039098184
VERSION     XM_039098184.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..813
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..813
                     /gene="LOC685226"
                     /note="similar to spermatogenesis associated glutamate
                     (E)-rich protein 4d; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:685226"
                     /db_xref="RGD:1596470"
     CDS             117..590
                     /gene="LOC685226"
                     /codon_start=1
                     /product="uncharacterized protein LOC685226 isoform X1"
                     /protein_id="XP_038954112.1"
                     /db_xref="GeneID:685226"
                     /db_xref="RGD:1596470"
                     /translation="MFARLRRHFGRVDVDGEESRVKQTKPKGNDGHRTWSCGMWKAYR
                     QTSSPETVLNKVQANEEEERLNRELELTTKERNELTDRLLYVTGGSMNKSNLHSRLLM
                     DQACMKKKLVTLKQECKEVQRYLFELNPNDEEEREKTSNLQTQQNLVSETAGDME"
ORIGIN      
        1 ggaaattcta ttatctccta gagagtcctt ggaatccctg tgatgtcacc agtgttgtag
       61 tgacaaccag ttccataatt tttctctctt agtgtccaaa ggatatatcc acaggcatgt
      121 ttgcccgtct tcgcaggcac tttgggagag ttgatgttga tggagaagag tctagagtga
      181 agcaaacgaa acctaaaggt aatgatggac acaggacgtg gtcatgtgga atgtggaagg
      241 cctacagaca aacgtcatcc cctgaaactg tcctaaacaa ggtgcaggcc aacgaggaag
      301 aggagaggct gaatagagaa ctggagctaa ctaccaagga gagaaatgag ctgacagatc
      361 gcctccttta tgtgacaggt ggatccatga acaagagcaa cctgcacagc cggctcctga
      421 tggaccaggc atgtatgaag aagaagttgg tcacattgaa gcaggagtgc aaggaggtac
      481 agcgatattt gtttgagttg aacccgaatg atgaagaaga acgggagaag accagcaacc
      541 tccagaccca gcaaaatttg gtctcagaaa ctgcaggaga catggaatag gacggatccc
      601 aggaagacag ccccctgaag aatgagtttc tttctcagga gttccctgtg acgacaatcc
      661 tcacagtcaa agactttttt tgggtgaata ttcttcttct cagttaattt cctcaatgtt
      721 tagagaccct aaatttatgt atctgtatgc cggcctgtct gattggggtc tttctccttt
      781 ctcataccga caacaccatt tgagagacaa ctg
//
