LOCUS       XM_039078103             908 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to carbonic anhydrase 13
            (LOC685173), mRNA.
ACCESSION   XM_039078103
VERSION     XM_039078103.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039078103.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 11% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..908
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..908
                     /gene="LOC685173"
                     /note="similar to carbonic anhydrase 13; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 Proteins, and 87% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:685173"
                     /db_xref="RGD:1597710"
     CDS             1..873
                     /gene="LOC685173"
                     /codon_start=1
                     /product="carbonic anhydrase 13-like"
                     /protein_id="XP_038934031.1"
                     /db_xref="GeneID:685173"
                     /db_xref="RGD:1597710"
                     /translation="MKEERSGLRGFLQVSSKKESTCKEAFHRGPWRGWGYDEHYGPIH
                     WNELFPIADGDQQSPIEIKTKEVKYDSSLRPLSIKYDPASAKIISNSGHSFNVDLDDT
                     EDKSVLHGGPLTGSYRLRQFHLHWGSADDHGSEHVVDGVRYAAELHVVRWNSDKYPSF
                     VEAAHESDELAVLGAFLQIGEHNPQLQKITDILDSIKEKGKQTRFTNFDPLCLLPSSW
                     DYWTYPGSLTVPPLLESVTWIVLKQPISISSQQLARFRSLLCTAEGESEAFLLSNHRP
                     PQPLKGRRVRASFY"
ORIGIN      
        1 atgaaggaag agagatctgg actgaggggg ttcctgcagg tgtcaagcaa gaaagaaagc
       61 acctgcaaag aggctttcca tcgaggacca tggcgaggct ggggatacga tgagcactac
      121 ggtcctattc actggaatga attgttccct attgccgatg gtgatcagca gtctccaatt
      181 gagattaaaa ccaaagaagt gaaatacgac tcctcactcc gacctctcag tatcaagtat
      241 gatcctgcct cggctaaaat catcagcaat agtggccatt ccttcaacgt tgaccttgac
      301 gacacagagg acaaatcagt tctgcatgga gggcctctca ctggaagcta caggttgcgg
      361 cagttccatc tgcactgggg gtcagcagac gaccatggct ctgagcatgt ggtggatgga
      421 gtgaggtatg ctgcagagct gcatgttgtc cgctggaatt cagacaaata ccccagcttt
      481 gtagaggcag ctcatgagtc cgatgagcta gctgtcctgg gagcatttct acagattggg
      541 gaacacaatc ctcaactgca aaagatcacg gacattttgg attccattaa ggaaaagggt
      601 aaacaaacac ggttcacaaa ttttgacccc ttatgtttgc ttccatcatc ctgggactac
      661 tggacatacc ctggttctct gacggttcca cctcttcttg agagtgtcac gtggattgtt
      721 ttaaaacaac ctataagtat cagctctcaa cagttggcca gattccgaag cctcttgtgc
      781 acagctgagg gcgagagtga ggctttcctg ttaagcaatc accgtccgcc acagcccctg
      841 aagggccgca gagtgagagc gtctttctat tagcaccaac cagtggatca gcacaaccag
      901 aacacgaa
//
