LOCUS       XM_039098188            3408 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to RIKEN cDNA 5031410I06
            (LOC685125), transcript variant X1, mRNA.
ACCESSION   XM_039098188
VERSION     XM_039098188.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3408
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3408
                     /gene="LOC685125"
                     /note="similar to RIKEN cDNA 5031410I06; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 100% coverage of the annotated genomic feature by
                     RNAseq alignments, including 3 samples with support for
                     all annotated introns"
                     /db_xref="GeneID:685125"
                     /db_xref="RGD:1597757"
     CDS             2770..3117
                     /gene="LOC685125"
                     /codon_start=1
                     /product="disks large homolog 5-like"
                     /protein_id="XP_038954116.1"
                     /db_xref="GeneID:685125"
                     /db_xref="RGD:1597757"
                     /translation="MNKSSYFRPNPFYEKLKIKKKEVMSLLHNLDTNNIEHREKFQEL
                     KKETNFYQNLHSRLLMDQACMKKKLVTLKQESKEVQRYLFELNPNDEDEEEKTSNLQT
                     QQNLVSEPAGEME"
ORIGIN      
        1 gaaatagcag gctggcatgt atgcaaattg ctgtgtttaa gctaggtatg gggacaagac
       61 ctcaaaacaa gctgttagga tgggaaacaa ataatgtgtt tgctgctgga attgagttac
      121 ctcagctgtg ttgctctgcc tgctcagtgc ccattcaacc tcactctgtt tctagagagg
      181 aactcaaggt ttgcccagct gcctgtgagc tgtgatatgg gcagagaaag gctaggacac
      241 agtgctgctt tcccactcct tagttatgct gaaattttca ctactgtacc tgtatataca
      301 agtacagtgt ggtcagttat tatagatatt tgtctatatg tataatagag ggcaacaatg
      361 attgactaca cccaattcta taaaaaacaa aactcaggaa acctggccat tggcagcaat
      421 gtaccaagaa acatctcgga tggggggggg catgaattct gccaagcaat gaactcagat
      481 aggtggggtt gggagaaaga tgtctggtca aatatcccac tagattcaca ttctatcatc
      541 ttgatttaat ctaaggacaa agaaatggag tatctctgat gtctttcttc taacccttgt
      601 aaggataact ggggtttgac ctcagttctt cacaattctt gctggggcag caacactcaa
      661 ggaagcttga gattgccata ggcacagtat taggctagaa atgctgagta gatgatacta
      721 agttgttcag atggtgatgc ccatttgcat gcattcttaa cctggaccta aggaaggaga
      781 gatcaaggtg cttagaatag agagatcatt tccagtcctt ttctaccatt ccagaatgaa
      841 agactggtcg gcagagaatg gtaaaaattc aagaattggt agatgatgct ttgaatgaag
      901 ggtgggtttc agtgctggtt ttagacagtg tctgaattac cccatgttgt tctctacatt
      961 gctcatcagg tgcactttga gctcatataa acctacttcc tctttccaat acacagtctt
     1021 acaaaggcgc ctccaaggac tatgaggaca ttcttagcca ttgagaactg aggtgtgtag
     1081 cccacaaata tagctttatc cactttcttc catgtctact agccatttga gattgttgtt
     1141 gtaatatgcc tgacaatcaa ggacatagaa aaataacttg atataataca aggacatagt
     1201 gatcatatcc tgcgtcgtta tgtatgttct ggatgaggtt tgttaaaatg acaatattgc
     1261 acaaagcttt atataggacc catcaaatta agggtcacta tgcactgtca tagctaaaat
     1321 ggcctagtca gaagtgacca ctggatcact cttctgtaac ttcacatgag aggcttgttc
     1381 ttgtgttttt tctttttctt tctttctttc tttgtttctt gttagttagt ttgtttgttt
     1441 atttatttat ttatttattt attcatttat ttatttattt attgctttct gtgttgtcaa
     1501 gaagatagtt caagtcatgg aactgccccc aaaatctgag ctatgcatct aatcaattag
     1561 tattagtgta cgcatacaat aaaataactt ggtttttttt ttaaattaca atagacgctc
     1621 ttgtgttttg tggggtaatc catgaaccag aagagaagat gcttgtttct tactctgtcc
     1681 actgagttat gtccctaggc ttgtcctact cctttggctg caccccatca tctgctgact
     1741 attttgtttt tcagatagaa tcgcatgtta gagcttagag aggcctgtaa gcaatcctgc
     1801 tttggtaact taagtgcaaa gaggagagcc ccacactcag cctgagggtg cattcactgg
     1861 tggatccaat atttcagttt cctctgccaa cagatctcca tgttgttgcc aggaccataa
     1921 ggaatgcaat actttctcct aaggaatctg gtggcaactg tcaaatgtta agtacaaagc
     1981 ttcaagtttt acccataaaa cacacccaca ttgctaacta ctctgcaggc tatttctgcg
     2041 tgtgatttca tgcacctgca caggatgaga caggagacct ctttggctac ttctttaaac
     2101 tggtgtgatt tctcagtaat ctttaatggg taatattgct cagtgaggat aatttgaggt
     2161 aggatgaaac atttctgtgc agggatttgg gaggaagcac tcatatagat acatagcaat
     2221 gacttaggtt tttccaatca agcctagagc caaatttggc tttggaagca tgtggtgctc
     2281 agtggctatg ccacagggaa gtctcctgaa aagggcacat cagcttttgc tcagtagagg
     2341 gaaaacatta gcagggaggc aaatctgttc tctgtgacat cagccatccc ttcttggaca
     2401 atctattgtc tcttagtgag tccttggaat ccctgtgatg tcaccagtgt tgtagtgaca
     2461 accagttccc taatttttct ctcttagtgt ccaaaggata tatccacagg catgtttgcc
     2521 cgtcttcgca ggtgctttgt tgatggagaa gagtctagag agaagcaaac gaaagctgaa
     2581 agtaatgatg gacacaggac gtggtcatgt ggaatgtgga aggcctgaag acaaacgtca
     2641 tcccctgaaa ctgtcctaaa caaggtgcag gccaacgagg aagaggagag gctgtttaga
     2701 gaactcgagc taactaccaa ggagagaaat gagctgacag atcgcctcct ttatgtgaca
     2761 ggtggataca tgaacaagag ctcctacttc aggccaaatc cattttatga aaaattgaag
     2821 ataaagaaga aagaggtaat gtcattactg cacaacttag acacaaacaa cattgaacat
     2881 cgtgagaaat ttcaggagct caagaaggag actaacttct atcaaaacct gcacagccgg
     2941 ctcctgatgg accaggcatg tatgaagaag aagttggtca cattgaagca ggagagcaag
     3001 gaggtacagc gatatttgtt tgagttgaac ccgaatgatg aagacgaaga ggagaagacc
     3061 agcaacctcc agacccagca aaatttggtc tcagaacctg caggagagat ggaataggac
     3121 tgatcccagg aagacagccc cctgaagaat gagtttctca ggagttccct gctgaggata
     3181 accctcaaca gtgaaagatg ctttttgggt gaatattctt cttctcagtt aatttcctca
     3241 atgtctagag accctaaatt tatgtatccg tatgccggcc tgtctgattg aggtgtttct
     3301 ccttcctcat tcctacaaca ccatttgaga gacaactatg cggactgcct tgacatctcg
     3361 tgtcctagag gagaaacagc actacaactg tgtttctaaa tgttcatt
//
