LOCUS       XM_039109070            1132 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus hypothetical protein LOC684976
            (LOC684976), mRNA.
ACCESSION   XM_039109070
VERSION     XM_039109070.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039109070.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 16% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1132
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1132
                     /gene="LOC684976"
                     /note="hypothetical protein LOC684976; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 8 Proteins, and 96% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:684976"
                     /db_xref="RGD:1584384"
     CDS             1..246
                     /gene="LOC684976"
                     /codon_start=1
                     /product="translation machinery-associated protein 7-like"
                     /protein_id="XP_038964998.1"
                     /db_xref="GeneID:684976"
                     /db_xref="RGD:1584384"
                     /translation="MEEMAVTEGSGEGAGGAVSGLEGGKKKPLKQPKKQAKEMDEEDK
                     AFKQKQKEKQKKFEELKAKAAGKGPLATGGIKKSGKK"
ORIGIN      
        1 atggaggaga tggctgtgac ggaagggtct ggtgaagggg caggaggcgc cgtgtcgggc
       61 ctcgaaggtg gcaaaaagaa gcccctgaaa cagcccaaga agcaggccaa ggagatggac
      121 gaggaagata aggctttcaa gcagaaacaa aaggagaaac agaagaaatt tgaggagcta
      181 aaagccaagg ccgcggggaa gggtcccctg gctacaggtg gaattaagaa atctggcaaa
      241 aagtaagctg ttctcacatc tgaggtgatg gtgaccctcc tcttccattc ctatgcagaa
      301 tgaagtgtta tcctgtaacc tgtcaaacat ctggattccc tgccgtaaca tctttgccac
      361 tacaactaga atgaagtgtt atcctggagc ctgttgttgt acactgtaat gaacttttgt
      421 aaaaaaacca ataaactgaa aagaaaagta taactgaaaa aaaaaaaaac aataaactga
      481 gtaacgcgat gtctcgttgt ctctcgtgtt cagcaattcc tacctcagct gtgaatttaa
      541 agtgaaccta gagcctgctg ctccatcctc gttgtactct gaattcttat cactttgaat
      601 taaaccaact catttaaaag ccaaaaaaaa aaaaagagag agacataggc atataaagct
      661 ctgtgagttt gaggccagtc tggtcagtgt attgaattcc aagctaacta ggactacaca
      721 gtaagatcct gcctttaaga aaagccttcc ttacacatta ttttctgaac tgggtctctt
      781 tctgcccaat ttagctagtc tatctagcca gcttgcccca aggatcccat ctctacctcc
      841 cttgccctta gaatacagaa tagctaccat accccttgct ctggagttaa atgttcttct
      901 agggatccaa accccaggcc tctgcttact gggctgtctc ctcagcccta ataataggat
      961 ctttgaaaaa gctcttagaa aggtcaggat aggagaaaca agagaggata gcagggtgta
     1021 cgtaacatga aaggagacag gcccactgga cagaggtggg caaagggaca aagttttgta
     1081 aagattatga cttcccacct gtaatccctg taattaggaa agcagaagca gg
//
