LOCUS       XM_039097783             981 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to olfactory receptor 556
            (LOC684179), mRNA.
ACCESSION   XM_039097783
VERSION     XM_039097783.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039097783.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..981
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..981
                     /gene="LOC684179"
                     /note="similar to olfactory receptor 556; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins, and 15% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:684179"
                     /db_xref="RGD:1593877"
     CDS             19..981
                     /gene="LOC684179"
                     /codon_start=1
                     /product="olfactory receptor 52I2"
                     /protein_id="XP_038953711.1"
                     /db_xref="GeneID:684179"
                     /db_xref="RGD:1593877"
                     /translation="MPGPSYNHTVGSPGTFFLLGVPGLQSSYLWLAISLSAMYSTALL
                     GNTLIIAVICMDPTLQEPMYFFLCVLAAVDVVMASSVVPKMVSIFSSGDSSISFNACF
                     TQMYFVHAATAVETGLLLAMAFDRYVAICKPLHYMRILTPHVMLGISVTITIRAAVFM
                     TPLSWMLSHLPFCASNVPHSYCEHMAVAKLACDDPMPSSLYSLIFSSIIVGSDVTFIS
                     ASYALILKAVFGLSSKNAQWKALSTCASHVGVMALYYLPGMASIYVAWLGQDAVPLHT
                     QVLLADLYLIIPPTLNPIIYGIRTRQIRERLWRLLTCCFSQQST"
ORIGIN      
        1 agagcagtct gaccagtgat gccgggtcca tcctacaacc acacagtggg atcccctggc
       61 accttcttcc tcttgggcgt cccaggctta cagtcttcct atctttggct ggccatctca
      121 ctgagtgcca tgtacagcac agccctctta ggaaataccc tcatcatcgc tgtgatctgc
      181 atggatccca ctctacaaga gcccatgtac ttcttcctat gtgttctggc tgctgtggat
      241 gttgttatgg cttcttctgt ggtacctaag atggtgagca tcttcagttc aggagacagc
      301 tccatcagct ttaacgcctg tttcactcag atgtactttg tccacgcagc cactgctgtg
      361 gagacaggac tgctgctggc catggctttt gatcgctatg tggccatctg caagccccta
      421 cattatatga gaattctcac ccctcatgtg atgctgggaa ttagtgtgac aatcaccatt
      481 agagctgctg tttttatgac tcccctgagt tggatgttga gccatttgcc tttttgtgcc
      541 tccaatgttc ctcactccta ctgtgaacac atggcagtgg ccaagttagc atgtgatgac
      601 cccatgccta gcagtctcta cagtttgatt ttttcctcca tcattgtggg ctcagatgtg
      661 accttcattt ctgcctctta tgctttgatt ctcaaggcag tttttggtct gtcctcaaag
      721 aatgcacagt ggaaggcatt gagtacatgt gcgtctcatg ttggggtcat ggcgctgtac
      781 tatctccctg ggatggcatc catctatgtg gcctggctag ggcaggatgc agttcccctg
      841 cacactcaag tgctgttagc ggacttgtac ctgatcatcc cacccacctt aaaccctatc
      901 atttatggca ttaggaccag acaaatccgg gagcggctat ggcgtctgct gacatgttgc
      961 ttctctcaac agtccactta a
//
