LOCUS       XM_003749925             549 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein S13
            (LOC683961), mRNA.
ACCESSION   XM_003749925
VERSION     XM_003749925.5
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051340.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_003749925.6.
            
            On Jan 21, 2021 this sequence version replaced XM_003749925.4.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..549
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..549
                     /gene="LOC683961"
                     /note="similar to ribosomal protein S13; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 9 ESTs, 8 long SRA reads, 65 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:683961"
                     /db_xref="RGD:1596535"
     CDS             21..488
                     /gene="LOC683961"
                     /codon_start=1
                     /product="40S ribosomal protein S13-like"
                     /protein_id="XP_003749973.3"
                     /db_xref="GeneID:683961"
                     /db_xref="RGD:1596535"
                     /translation="MGHMHAPSKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKL
                     AKKGLTPSQIGVILRDSHGVAQVRFVTRNKILRILKSKGLAPDLPEDLYHLIKKAVAV
                     RKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNWKYESSTASALVA"
ORIGIN      
        1 gcttccagac ctccgccatc atgggccaca tgcacgctcc cagcaagggc ctgtcccagt
       61 cggcgctgcc ctaccgccgt agcgtgccca cgtggctgaa gttgacgtct gacgacgtga
      121 aggaacaaat ttacaagttg gccaagaagt tggccaagaa aggcctgact ccttcccaga
      181 taggtgtgat tctgagggac tcacatggtg tggcacaggt ccgttttgtg accagaaata
      241 aaatcttgag aatccttaag tccaaaggcc ttgcccctga tcttcctgag gatctctacc
      301 atttgatcaa gaaagcagtt gctgtcagaa agcaccttga gaggaacaga aaagataagg
      361 atgctaaatt ccgcctgatt ctaattgaga gcagaattca ccggctggct cgatactata
      421 agactaagcg ggtgctccca cccaactgga aatatgagtc atccacagcc tctgctctgg
      481 tggcataaat gctgttgcgt acacaagcaa taaaatcact ttgagtaaaa aaaaaaaaaa
      541 aaaaaaaaa
//
