LOCUS       XM_039103300            1343 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to keratin complex 1, acidic,
            gene 18 (LOC683212), mRNA.
ACCESSION   XM_039103300
VERSION     XM_039103300.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051337.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039103300.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="2"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1343
                     /gene="LOC683212"
                     /note="similar to keratin complex 1, acidic, gene 18;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 ESTs, 8 Proteins, and 97% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:683212"
                     /db_xref="RGD:1589269"
     CDS             21..764
                     /gene="LOC683212"
                     /codon_start=1
                     /product="keratin, type I cytoskeletal 18-like"
                     /protein_id="XP_038959228.1"
                     /db_xref="GeneID:683212"
                     /db_xref="RGD:1589269"
                     /translation="MSFTTCSTTFSTNYRSLGSVRTPSQRVRPASSAASVYAGAGGSG
                     SRISVSRSVWGGSVGSAGLAGMGGVQTEKETMQDLNDRLESYLDKVKNLETENRRLES
                     KIREYLEKRGPQGVRDWGHYFKTIEDLRAQIFANSVDNARTDLQIDNARLAADDFRVK
                     YETELAMGQSVESDIHGLRKVVDDTNITRLQLETEIKALKEELLFMKKNHEEEVQGLE
                     AQIASSGLTVEVDAPKSQDLSKIMADIRA"
ORIGIN      
        1 cactctcctc tccagacaag atgagcttca ccacctgctc caccaccttc tctaccaact
       61 accggtccct gggctctgtg aggactccca gccagcgggt ccggcctgcc agcagcgccg
      121 ccagcgtcta tgcaggtgct gggggctcag ggtcccggat atccgtgtcc cgctctgtct
      181 ggggtggttc cgtggggtcc gcaggcctgg cgggaatggg tggggtccag actgagaagg
      241 agaccatgca agacctgaac gaccgcctgg agagctacct agacaaggtg aagaacctgg
      301 aaactgagaa caggagacta gagagcaaaa tccgggaata tctggagaaa aggggtcccc
      361 agggcgtcag agactggggc cactacttca agaccatcga agatctgaga gctcagatct
      421 ttgcgaattc tgtggacaat gcccgcaccg acctgcagat cgacaatgcc cgtcttgccg
      481 ctgatgactt tagagtcaag tatgagacag aattggccat gggccagtct gtggagagtg
      541 acattcatgg actccgcaag gtggtggatg acaccaacat cacaaggttg cagctggaga
      601 cagaaatcaa agcgctcaag gaggagctgc tgttcatgaa gaagaatcat gaggaggaag
      661 tccaaggcct ggaagctcag attgccagtt ctgggttgac tgtggaagtg gatgctccca
      721 aatctcagga cctcagcaag atcatggcgg acatccgcgc ctagtatgaa cagctggctc
      781 agaagagccg taaggaactg gacaagtact ggtctcagca gattgaggag agtaccacga
      841 tagtcaccac caagtctgcc gaaatcaggg acgctgagac cacactcttg gagctgagac
      901 gcaccctcca gaccttggag attgacctgg actcgatgaa aaaccagaac atcaacttgg
      961 agaacaacct cggggaagtg gaggccagat acagggcgca gatggagcaa ctcaatgggg
     1021 tccttctgca tctggaatca gagctggcac aaactcgggc agaaggacag cgccagaccc
     1081 aggaatatga agccctgttg aacatcaagg tcaagcttga ggcggagatt gccgcctacc
     1141 gccgcttgct ggaggatggg gatgatttca gtctcaacga cgccctggac tccagcaact
     1201 ccatgcaaac tgtccagagg acaactaccc gtaaggtcgt ggatggcaaa gtggtgtccg
     1261 agaccaatga taccagagtt ctgaggcact aaggctcaga agaagggaac cccctgggac
     1321 tgagggacca ataaaagttg aga
//
