LOCUS       XM_039100154             610 bp    mRNA    linear   ROD 22-FEB-2024
DEFINITION  PREDICTED: Rattus norvegicus high-mobility group box 4 like 3
            (Hmgb4l3), mRNA.
ACCESSION   XM_039100154
VERSION     XM_039100154.1
DBLINK      BioProject: PRJNA1074393
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086039) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036323735.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 13% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..610
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /bio_material="RGD 61498"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney, spleen, liver"
                     /geo_loc_name="USA: Wisconsin, Milwaukee"
                     /lat_lon="43.05 N 88.04 W"
                     /collected_by="Rebecca Schilling, Melinda Dwinell"
     gene            1..610
                     /gene="Hmgb4l3"
                     /note="high-mobility group box 4 like 3; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:683006"
                     /db_xref="RGD:1591601"
     CDS             59..610
                     /gene="Hmgb4l3"
                     /codon_start=1
                     /product="high mobility group protein B4-like"
                     /protein_id="XP_038956082.1"
                     /db_xref="GeneID:683006"
                     /db_xref="RGD:1591601"
                     /translation="MMEQSPNTYHGFAEFSRKYSENWRSISKQEKAKYEALAKLDKAQ
                     YREEMTNYTGKKRKRKERCKCTSEAPSSFLLFSRDHFAQLRQENPNWVMLDVAKCVGK
                     MWSMSVNVDKIPYEQNAALMCGQSTSRSRRPTTTNVRATMSGQEEELLGIVQEQFEAI
                     KPHSTGFLALGFCICRLSLDALL"
ORIGIN      
        1 tccccaaccc gtgaatgtct cttcttacat ccattttata ctgaatttca ggaagcaaat
       61 gatggaacag tcgccaaaca cctaccatgg ctttgcagaa ttctctagaa agtattcaga
      121 aaattggaga tccatctcaa agcaggaaaa ggcaaagtat gaagccctag ccaagctcga
      181 caaagcccag tacagggaag agatgacgaa ttacacagga aagaaaagaa agagaaagga
      241 gagatgtaaa tgcacctcag aagccccatc ctcattcctg ctcttctccc gggaccactt
      301 tgcccagctg aggcaagaga acccaaactg ggtaatgctg gatgtggcca agtgtgtggg
      361 caagatgtgg tccatgtctg tcaatgtaga caaaattcct tatgaacaga atgctgcact
      421 tatgtgtggg caaagtactt caaggagcag gaggcctacc accaccaatg tcagggcaac
      481 aatgtcaggg caagaagagg aacttcttgg gatagtgcaa gaacagtttg aagcaataaa
      541 acctcattca actggctttc tggccctagg gttttgtatt tgcagactgt ccttggatgc
      601 cctgctatag
//
