LOCUS       NM_001134732            2305 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus similar to human chromosome 1 open reading frame
            94 (C5h1orf94), mRNA.
ACCESSION   NM_001134732 XM_001059853
VERSION     NM_001134732.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2305)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2305)
  AUTHORS   Bonaldo MF, Lennon G and Soares MB.
  TITLE     Normalization and subtraction: two approaches to facilitate gene
            discovery
  JOURNAL   Genome Res 6 (9), 791-806 (1996)
   PUBMED   8889548
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CK653557.1, CV103711.1, BC168197.1 and AW527891.1.
            
            On Sep 5, 2008 this sequence version replaced XM_001059853.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: mixed sample support SAMEA5760383, SAMEA5760389
                              [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-634               CK653557.1         39-672
            635-693             CV103711.1         503-561
            694-2267            BC168197.1         1-1574
            2268-2305           AW527891.1         1-38                c
FEATURES             Location/Qualifiers
     source          1..2305
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="5"
                     /map="5q36"
     gene            1..2305
                     /gene="C5h1orf94"
                     /note="similar to human chromosome 1 open reading frame
                     94"
                     /db_xref="GeneID:682102"
                     /db_xref="RGD:1586982"
     exon            1..461
                     /gene="C5h1orf94"
                     /inference="alignment:Splign:2.1.0"
     CDS             148..1935
                     /gene="C5h1orf94"
                     /codon_start=1
                     /product="uncharacterized protein C1orf94 homolog"
                     /protein_id="NP_001128204.1"
                     /db_xref="GeneID:682102"
                     /db_xref="RGD:1586982"
                     /translation="MRAGGGQSLCLPALGGQRGFRKERKRMASGNGLPPSSALVAKRP
                     SALGPFPRYVWIHQDTPQDSLDKICHDIWKRVQGLPESLQPRTSLEKLSAPVTAAVSF
                     QDEALELSGGKDEISLLVEQEFLSLTKEHLILVQEGSGELATPIVTPQGTRELAPCFL
                     VPPLGADSTEYAGSSIMAGDKLREQKLSMPIIGSRQDSDSAMSTVTGILRAAKVKSVK
                     GTKDKSHSLGASNSEISKLLAQFPLKSTEMSKAPDNKMVLEETKVIKDFLQNSMFNGS
                     GPRESMGLGPFLLLPPPPPPAVPDKLPEFSPPKRQLPVFAKICSKTEADPALEGHHWI
                     ERSPGTKEFTKSRESLFLNQWPQNRKDTCGEEGHSDPMGTISMTLPTKKPVWPAEKNL
                     LYEFFGATKNPTGQLRLRTKVDMDGLDLKFNSPTTVPEKNIKYAGNVFAPRFTTALTS
                     TTLNQPLWLNLNCPPPPVFSSHSTFPQYQGLYPQRSTRMPYQQPIHPPLGCYSRQVTP
                     YNPQQMGQQIFRSSYTPLMSYIPFVQPNYPYPQRTPQKLPANPRDPPPMAGDGPPYLF
                     PQGYGFNSAPSGPLMNSAYFSSSGNGIRF"
     exon            462..1150
                     /gene="C5h1orf94"
                     /inference="alignment:Splign:2.1.0"
     exon            1151..1411
                     /gene="C5h1orf94"
                     /inference="alignment:Splign:2.1.0"
     exon            1412..1584
                     /gene="C5h1orf94"
                     /inference="alignment:Splign:2.1.0"
     exon            1585..1662
                     /gene="C5h1orf94"
                     /inference="alignment:Splign:2.1.0"
     exon            1663..1859
                     /gene="C5h1orf94"
                     /inference="alignment:Splign:2.1.0"
     exon            1860..2290
                     /gene="C5h1orf94"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 taagcccccc ctccccaaaa gaaagttgcc ctctactcct catcctcacc caaaccgaag
       61 gcctctgaaa cccatccctt ggctggagca acagccagcc agaactgact acttcccagg
      121 tccagtcttc agctcccttt ctggtgaatg agggctggtg gaggacagtc cctttgtctc
      181 ccagccctgg gcggacaaag gggcttccga aaagagagaa agaggatggc cagtggaaat
      241 gggctccctc catcctcagc cctggtggcc aagcgtccct ccgccctggg gccattcccc
      301 agatatgtct ggatccacca ggacacaccc caggatagcc tagacaagat ttgccatgac
      361 atctggaaga gagttcaggg cttgcctgag tccctgcagc ccaggacctc tctggagaag
      421 ctctctgccc cggtgacagc cgctgtcagc ttccaagacg aagctttgga actgagcggt
      481 ggcaaggatg agatctccct gctggtggag caagagttct tgagcctcac taaagaacat
      541 ctcatcttgg tccaagaggg ctctggggag ctggcaacac ctattgttac tccccagggg
      601 acccgggagc tggctccctg ctttcttgtg cctcctcttg gggcagacag caccgagtat
      661 gcaggatcct ccataatggc tggtgacaaa cttcgggagc agaagctgtc catgcccatc
      721 atcggcagca ggcaggactc tgattctgcc atgtctacag tcaccggcat cctgcgagcg
      781 gccaaggtca agagtgtgaa ggggactaaa gacaaaagtc atagcctggg tgcctctaat
      841 tcagagatca gcaagctcct ggctcagttc ccactgaagt caactgaaat gtccaaggcc
      901 ccagacaaca agatggtgct ggaagagacc aaggtcatta aggacttcct gcagaatagc
      961 atgttcaatg gctccggacc ccgggagtcc atggggctgg gcccattcct gctgctgcca
     1021 cccccacctc ctcccgcagt ccccgacaaa ctccccgagt tctctcctcc gaagaggcag
     1081 ctcccagtgt ttgccaagat ctgctccaag actgaggctg acccagctct tgagggccac
     1141 cactggattg aacgaagtcc tggcacaaaa gagtttacca aaagtcgaga gagcctcttt
     1201 ctcaaccagt ggccccagaa ccggaaggac acctgcggtg aggagggtca cagtgaccca
     1261 atgggtacca tctccatgac tctgccaacc aagaagcccg tgtggccagc agagaaaaac
     1321 ctgctctatg agttctttgg ggccaccaag aatcccactg ggcagctgag gcttcgaacc
     1381 aaagtggata tggacggact ggatctgaaa tttaactccc ctacaacggt gcctgaaaag
     1441 aacattaagt atgccgggaa tgttttcgcc cctcgcttca ccacagcctt gacctcgacc
     1501 accctgaacc agcctctctg gctcaatctg aactgtccac ctccaccggt gttttccagc
     1561 cactctacct tcccgcagta tcagggcctg tacccacagc ggtcaacaag gatgccctac
     1621 cagcagccca tacacccacc actggggtgc tactccagac aggtgacacc gtacaaccca
     1681 cagcagatgg gacagcagat tttccgctct tcctacaccc ccctgatgag ctacatcccc
     1741 ttcgtccagc ccaactatcc atatcctcag aggacccccc agaagctgcc tgccaatccc
     1801 agagaccctc ccccgatggc aggagatggg cctccgtacc tcttccccca gggatatggg
     1861 ttcaactctg cgcccagcgg ccccctgatg aacagcgcct atttttcctc cagtgggaat
     1921 ggtatacgct tttagacttc tctctctctc tctcccctcc acctctcttt gcccttggat
     1981 cagggctaaa ggttctggaa ttctggattc tgcaacagct tggtgtgaag tttggaaagc
     2041 caaggttcca accaggtggc cgacagaaaa cagcaagacc agattcctct actggccaac
     2101 actcacctgc atagcgcccc cctcacatgt agtgcacacc acagacgcac cccccatttg
     2161 taagaccaca caggcacctg tatttagcta acatgactgg tttttgtttt tgttgttgtt
     2221 ggtaagatag aaagtaagac acttaattta gaacgtttgt atgttatggt aaaactatga
     2281 gctgcttgaa aaaaaaaaaa aaaaa
//
