LOCUS       XM_008759288            2770 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to putative pheromone receptor
            (Go-VN5) (LOC681871), mRNA.
ACCESSION   XM_008759288
VERSION     XM_008759288.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_008759288.3.
            
            On Jan 21, 2021 this sequence version replaced XM_008759288.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2770
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2770
                     /gene="LOC681871"
                     /note="similar to putative pheromone receptor (Go-VN5);
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 44 Proteins, and 26% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:681871"
                     /db_xref="RGD:1590493"
     CDS             194..2770
                     /gene="LOC681871"
                     /codon_start=1
                     /product="vomeronasal type-2 receptor 116-like"
                     /protein_id="XP_008757510.2"
                     /db_xref="GeneID:681871"
                     /db_xref="RGD:1590493"
                     /translation="MFYWIFISWFLQIPKFVSSIMTVDISLCFYIIPEDFHHEGDVVI
                     GAFFPIHTYYSPNKVPYKTLPYQYMDNYLQYNFKNYQYILALVLAIEEINGNPNLLPN
                     ISLGFDFYNVRFTEKETLMNVCIWITGQGQKKILPNYNCNKRIFTAALTGTSCTASAQ
                     IGTLLQLFQFPQLSFGPYDPILSDRGQYSSLYQMAPKYTSLSLGIVSLMVHFRWSWVG
                     LILPDDHKGTKILSEFREDMERKGVCIAFLRIIPVTWTKHFNKFWENMEETNVIIIYG
                     EIDSIIGIMRNIGQRLLTWKVWVMNIEPHITDFADYFMLDSFHGSLIFTHHYKESFEL
                     TKFIQTVNPYKYPEDIYLPKLWHLFFKCPFSDIDCQLLDNCQSNASLDILPSHILDTA
                     ISEESNNIYNAVYAVAHSLHQMSLQQVQIQPHEIGEVMTFFPWQLNIFLKDMDERGNM
                     SLGGRKKLNAEYDILNLWNLPKGLGRKVKIGSFSGNAPEGQQLSLSEPMIQWAERFSE
                     IPKSVCSKSCVPGFRKVTLEGKAICCHNCTPCADNEISNETDVDQCMKCPESHYVNPE
                     KNHCLQKTVSFLAYEDPLGMTLTSISLCLSALTAFVIGVFVKYRETPIVKANNRGLSY
                     TLLITITFCFLCPLNFIGQPNAATCILQQTIFGVAFTVALATVLVKAITVVIAFKVTF
                     PGRIVRWLMTSRAPNCIIPICTLIQLLFCAIWMATSPPFIDQDFHAEHGHILLLCNKG
                     SSLAFHCVLGYLCSLALGGYTMAFLSRNLPDTFNESKFLSFSMLVFFCVWVTFLPVYH
                     STKGKVMVAMEVFSILVSSAALLGFIFAPKCYIILLRPEKNSFHHMRDKAHSRKNKSL
                     KI"
ORIGIN      
        1 tagagcccaa gaaaaatagt ttaaaaattc ccaatagaat ggaagtaggc aacagaaaaa
       61 ttttggaatg attagtgtga cagcctcact actggacaaa gttaaaaaca accatagtga
      121 taaaacatga cctcaacata tatctagtag gcagtgccag ttctgcagca agtgaaccaa
      181 tgtatcaata aagatgtttt actggatctt tatttcctgg ttcttacaga ttccaaaatt
      241 tgtctcttcc attatgactg tggatatcag cctgtgcttt tacataatcc ctgaagattt
      301 tcaccatgaa ggagatgttg tgataggtgc attttttcct attcatacat actattctcc
      361 aaacaaagtt ccatataaaa ctcttccata ccaatatatg gacaattatt tacagtataa
      421 ttttaagaac taccagtata ttctggcttt ggtattggct attgaggaga taaatgggaa
      481 tcccaatctt ttacctaata tatctcttgg atttgatttc tacaatgtca gattcactga
      541 gaaggaaaca cttatgaatg tttgtatttg gatcacaggt caaggacaga aaaagatttt
      601 accaaattac aattgtaaca aaagaatttt tactgccgca cttacaggga catcatgtac
      661 agcatctgcc caaattggaa cattacttca actctttcag tttcctcagc tttcttttgg
      721 accttatgat cccattttga gtgatcgtgg tcaatattct tctctgtatc agatggcccc
      781 aaagtacaca tctctttcac ttggcattgt atctttgatg gttcatttta ggtggtcctg
      841 ggttggtctc atccttccag atgaccacaa agggaccaaa attttatcag aattcagaga
      901 agatatggaa agaaaaggag tctgcatagc ttttttgaga ataatcccag tcacatggac
      961 taaacatttt aacaaattct gggaaaatat ggaagagaca aatgtcataa ttatttatgg
     1021 tgagattgat tccatcatag gtataatgcg aaatattggg caaagattgt tgacatggaa
     1081 agtctgggtc atgaacattg aacctcatat tactgacttt gctgattatt tcatgcttga
     1141 ctcatttcat ggtagcctta tttttacaca ccattataaa gagagttttg aacttactaa
     1201 gtttattcaa acagttaatc cttacaaata tccagaagac atttaccttc ctaagttatg
     1261 gcatttgttc ttcaagtgcc cattttctga tattgactgt caactattgg ataactgtca
     1321 atccaatgcg tctctggata tattacctag tcatatattg gacacggcaa tcagtgaaga
     1381 aagcaacaat atctacaatg ctgtgtatgc tgtggctcac agtctccatc agatgagtct
     1441 tcaacaagta caaatacaac cacatgaaat tggggaagtg atgactttct tcccctggca
     1501 gctaaacatt ttcctaaagg acatggatga gagaggcaac atgagtttag gtgggagaaa
     1561 gaaattaaat gcagaatatg acattcttaa cctttggaat ttaccaaagg gtcttggacg
     1621 taaagtgaaa ataggatcct tttcaggaaa cgctcctgag ggtcaacaat tatccttatc
     1681 tgagcctatg atacaatggg cagaaagatt ttcagagatc cctaagtctg tgtgcagtaa
     1741 gagttgtgtg cctggattca gaaaagttac cctggagggc aaggccatct gctgtcataa
     1801 ttgtactccc tgtgcagaca atgagatttc aaatgagaca gatgtggatc agtgtatgaa
     1861 gtgtccagag agtcattatg taaatccaga gaagaaccac tgcttgcaga aaactgtgag
     1921 ctttcttgcc tatgaagacc ccttggggat gactctgacc agtatatctc tctgcttatc
     1981 tgcactcaca gcttttgtta ttggggtctt tgtgaaatac agagagactc ccattgtgaa
     2041 agccaataat cgaggtctca gttacacttt gctcatcaca atcacctttt gttttctctg
     2101 tcctttgaac tttattggtc aaccaaatgc agccacctgt atcctccagc agaccatatt
     2161 tggagttgca ttcactgtag ctctggctac tgtattggtc aaggctatta ctgtggtcat
     2221 tgccttcaaa gtcacctttc cagggagaat tgtgaggtgg ttaatgacat caagggcacc
     2281 aaactgtata attcctatct gtactctgat ccaacttctt ttttgtgcaa tatggatggc
     2341 aacctctcct ccattcattg accaagattt tcatgctgaa catggacaca tcctactttt
     2401 gtgtaacaag ggatcatctc ttgccttcca ctgtgttctg ggatacctct gctctctggc
     2461 acttggtggt tacaccatgg cattcttatc tagaaatctg cctgatacat tcaatgaatc
     2521 caaatttctg tcattcagca tgctggtgtt cttctgtgtc tgggtcacat ttcttcctgt
     2581 ctaccatagc actaagggga aggtcatggt ggctatggaa gtattctcta tcttagtttc
     2641 cagtgcagca ctccttggtt ttatatttgc tcctaagtgt tacattatct tgttgagacc
     2701 agaaaagaat tcatttcatc atatgaggga caaagcacat tctagaaaga ataagtctct
     2761 taaaatatag
//
