LOCUS       NM_001416978            5195 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus ANTXR like 3 (Antxrl3), mRNA.
ACCESSION   NM_001416978 XM_039094918
VERSION     NM_001416978.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            On Feb 23, 2023 this sequence version replaced XM_039094918.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643293.73751.1,
                                           SRR26360181.2035271.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-463               JAXUCZ010000016.1  9338686-9339148
            464-532             JAXUCZ010000016.1  9346330-9346398
            533-604             JAXUCZ010000016.1  9347355-9347426
            605-686             JAXUCZ010000016.1  9349610-9349691
            687-720             JAXUCZ010000016.1  9349798-9349831
            721-800             JAXUCZ010000016.1  9350708-9350787
            801-869             JAXUCZ010000016.1  9350858-9350926
            870-950             JAXUCZ010000016.1  9351209-9351289
            951-1005            JAXUCZ010000016.1  9351383-9351437
            1006-1104           JAXUCZ010000016.1  9354265-9354363
            1105-1174           JAXUCZ010000016.1  9355747-9355816
            1175-1253           JAXUCZ010000016.1  9356328-9356406
            1254-1562           JAXUCZ010000016.1  9357134-9357442
            1563-1601           JAXUCZ010000016.1  9358040-9358078
            1602-1763           JAXUCZ010000016.1  9359041-9359202
            1764-5195           JAXUCZ010000016.1  9360992-9364423
FEATURES             Location/Qualifiers
     source          1..5195
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16p15"
     gene            1..5195
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /note="ANTXR like 3"
                     /db_xref="GeneID:681303"
                     /db_xref="RGD:1596785"
     exon            1..463
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     CDS             222..2009
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /note="anthrax toxin receptor-like; leucine-rich repeat
                     extensin-like protein 3"
                     /codon_start=1
                     /product="similar to tumor endothelial marker 8 isoform 1
                     precursor"
                     /protein_id="NP_001403907.1"
                     /db_xref="GeneID:681303"
                     /db_xref="RGD:1596785"
                     /translation="MQDYGPQASCSVYLLLLPLLSMPFIAVQSFLYPQSIQKPYPEET
                     ARFFNYQFSKSTKIGVDEEDPLQYCEGDFDIYFVFDKSKAVTSWNDLYTSWEDLVEKY
                     VNPKQHMSFILFDTRASIKTPLISERWKIRQELTKLDSQVLEGATNLQKGLEKANEQI
                     QNVNSGATKRSSLIIAAVWGELTPQVLKESKDEADKARSMGAYVYCVGLNSSERQKLN
                     EITDNEENVFILDGQSNRFHSIVDEIGTMACLELRTVEFPCIGENRPVILRGYGFHNP
                     KNSSEVICRFKFTNSTIIDESPIDKNSTVIFCPAPKLKQPGQTILVEVSLNRGREFLA
                     HTIPVNTSNCVPPPVTTTSTLPTTLTTSTSPVPTTPLPPPPPPLPPPPPRPVPPPAPP
                     PPPPPPPPPPRPPPPPAIVRPPAEPSKEVLLSTVVLLLMLVPVLLWWVWWLCCRSPVK
                     ARPAPAPQPKKEKPPPPVPPPTPPPPPPPPPPPPPPPPPPVKAPPIVIICCSTCYDVC
                     VRRGEEGPYINLDLLADLCSQAPSTSKAGFLSLEEYLSLASCSKCHHLPHRCPRLFPL
                     LPPPARVSPKAPLSLLPTQQTSQKPQRQD"
     exon            464..532
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            533..604
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            605..686
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            687..720
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            721..800
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            801..869
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            870..950
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            951..1005
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            1006..1104
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            1105..1174
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            1175..1253
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            1254..1562
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            1563..1601
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            1602..1763
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
     exon            1764..5195
                     /gene="Antxrl3"
                     /gene_synonym="AABR07024653.1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 agaggcagga taccccagaa cagctatgtc cccagttcct atgctctgag gccaccgagt
       61 ggaaagcagc agtaagaatt ggtgagagga cacaagggct attgtcccta agtgcagaca
      121 gaggcaccag agaacaaaat gaggggtggc tagaacttag cctacctaga ccctggcaca
      181 agctcccaaa ttctagcaga ctcacaggac cagccaagaa aatgcaggac tatggtcccc
      241 aggcttcctg ttcggtgtac ctgctgctgc taccactatt gtctatgcca tttattgcag
      301 tccagagctt cctgtaccct caatctatcc aaaaacccta tcctgaggaa actgctaggt
      361 tcttcaatta tcaattcagt aagtcaacca agattggggt agatgaggaa gatcccctgc
      421 agtattgtga aggtgacttt gacatttact tcgtctttga caagtccaaa gccgtaactt
      481 cgtggaatga cttgtacaca tcctgggaag atttggtgga gaaatacgtg aaccccaaac
      541 agcatatgag cttcattctg tttgatacca gagcttcaat caaaacgcca ctcatctcag
      601 aaaggtggaa gatccgccaa gagctcacca aacttgacag ccaggtgtta gaaggagcga
      661 caaatctaca gaaaggactg gaaaaggcta acgaacagat ccaaaatgtc aactcgggag
      721 ccactaagag gtctagtctg atcattgctg ccgtttgggg ggaattgaca ccacaagtat
      781 tgaaggagtc taaggacgag gctgataaag ctcggagcat gggagcctat gtttactgtg
      841 tcggtctaaa ctcctctgag agacaaaagt tgaatgagat cacagacaat gaggaaaatg
      901 tgttcatttt ggatggccag tcgaatcggt tccattccat agtagacgag attggcacaa
      961 tggcctgcct tgaactccga actgttgagt ttccatgcat aggagaaaat cgcccagtga
     1021 tcttaagagg atacggcttc cacaacccaa agaattccag tgaagtcatt tgcagattca
     1081 agttcaccaa ctccacgatc atcgatgaaa gtccgatcga taagaactcc actgtcatat
     1141 tttgtcctgc accaaaactg aagcaacctg gacaaaccat cttagttgaa gtaagcctga
     1201 acagaggaag agagttcctt gcccacacca tccctgtgaa tacttctaac tgtgtacctc
     1261 cgccagtgac taccacctct accctcccaa caactctcac aacttcaaca agccctgtcc
     1321 caacaactcc actccctcct cctccccctc cactccctcc tcctccaccc cgtcctgtcc
     1381 cacctcctgc acctcctcct cctcctcctc ctccgccgcc gccgccgcgg ccacctccac
     1441 ctccagccat tgttcgtcca ccagctgagc caagcaagga agttttgctc agcacagtgg
     1501 tcctgctcct gatgctggtc cccgtgttgc tgtggtgggt ctggtggctg tgctgcaggt
     1561 cgcctgtcaa ggcacggcca gcacctgcac cacaaccaaa gaaagaaaag ccccctcctc
     1621 cagtgcctcc cccaactcca ccaccaccac caccaccacc accaccacca ccaccaccac
     1681 caccaccacc agtgaaagca ccccccatcg tgatcatttg ctgcagtacc tgctacgatg
     1741 tatgtgtgag aagaggtgaa gaggggccgt acatcaacct tgacctcctg gcggacctct
     1801 gttctcaagc tcccagcacc tcgaaggccg gcttcctctc attggaggag tacctgtccc
     1861 tggcctcctg ttccaagtgc caccatctcc cacaccgttg tcccaggcta tttcctttgc
     1921 tccctccccc tgcccgggtg tctcccaaag ccccattgtc gctccttccc acgcagcaga
     1981 cctctcagaa gccacaaaga caagattgag agtacttggc tgctaattgg gacccatgta
     2041 tctgttcttg gatttcaatg ttaaaagagt tggatttttt ttattaggaa gtttgtcatc
     2101 caaaggtaag ccgcagatgt gtttctgggg cacccagaac gacaaaactt agtggtgtca
     2161 catggctggg caccaatgag ttctacggcc acaggttctt aagtcaagct ctatatgaag
     2221 agcaatccca aattcatcct gagagtaaac ttcacagccg tggaagcatg cctggggcta
     2281 caggcgtata ccattgcatg tcaaatactt aactacctga gccacctttt agtccagtgg
     2341 ttctcaacct atggggcatg accaatttgg gggtcgcata tcaggtatct ggcatatcag
     2401 acatttattt acattatgat tcataaaagt ggcaaaatta caattataaa gtagtaacat
     2461 gatgctttat acttgatgtt tgggggtcac cacaacatga ggaactgtat taaagggtct
     2521 cagcattagg agagaagctc tacggccccg ttctagtgcc ttggtcaacc tttttctttg
     2581 ttatgggttt tgttttgcaa agaagtttca agtcatgcat atacagagat tttttaacta
     2641 aagtccgagt gttactactc cactgtcagg aagaagtata tcggacaaag gcatcagatg
     2701 gcaggaccca cgtacagtcc atggcgtggg gcagggtcca gagagaaggg acacagatat
     2761 ccctggagtg tatttaccct gagcacatca cccaagatga cttgtagatg tgtccagacc
     2821 agccatggca ggcaagctct caaagggtat caggacacta gatccctgga aacccagaga
     2881 ataaatgtag ccaagaaaaa tgtaggcatg caagagaaat ggcatctatt ccctagaagc
     2941 aatatgtttt acggctgtct ctacctggtt tggggaataa ggctcagtcc acatttccct
     3001 gccctgggct ctctatgtgc atttcatacg tatcctaccc ttctctaatc tgggacccca
     3061 cctagcatgt gccgatccag tttgctgatt cactgaccgt gaaaggccag ttcatgaaca
     3121 cagtgggagc ctttgtgccc tggccttcat gaattagagt cttgcccctg cttaggagcc
     3181 ataggactta gggggaaaag cttcctccac tctggccatc cacagggacc ctcaccagac
     3241 tctctgcagt gatcagtgtc agagacagca agagggaaag agcaacatca ccaagtcccc
     3301 ctcgtcactt tcagtccctc atgaaaagga agatggggta tggcccccca cttacctgac
     3361 tcgcaaagag agtgtgttta gctccactac ccgttgagcc tcagcccctg tgtcttaggg
     3421 agaagcagga tattttcagg taagtctcac tttggagcat caccaagctg aaatagaatt
     3481 gatgcttagc ctagaccacg gtggtagaga ctccatgagt gaacatcatt caaagcctgt
     3541 ggtgacctct tagaagagtc aaaatgagtc aagatggccg aagtgatgag tggccctgac
     3601 aaactgcccg gcattcttcc tacaaatggt ggcacatgac cggatggaca gtagcttgtg
     3661 ccaccttcca taccgatctc tctggggaca gcttgcatgc caagcagcat caaaaacggc
     3721 tgacgggctg agccttccgg ggatcctctc aaatgtgcga ggtccctcag ggattcagta
     3781 gggatggaag gttttcattg acacctactg acagcagcct ggctggtaaa gatgtctgcg
     3841 agcctagtct ttaccgtgag cgagagacag aagcacagct gtattcccag ttacaagacc
     3901 ctcagccttc tgtctgtctg ggcccagctt ccctggtgct accaggtgct tccctggtcc
     3961 cgggccacct ctctgacata gaatgagagg acccaggggt cttgctgtat gtactgtaag
     4021 gaagaaaacc tgacagtctc cgattcccct tcccagaggc cagaagtgca actctgtccc
     4081 tggtcaaggg tgactttgag cacttgtgac ctcagccaag tcagaagaca aggaggaggc
     4141 tctgccctct ccagcagaga acatgcctat tgtgccagag atactcccag aagacatctc
     4201 tctggtgcag aactgggtac caggttctct ataacgctga ggacagcagt ttccccattt
     4261 atttcaaatg ctctgtgatt tttcacaaga caagggtcac aggtatagct gaccagacac
     4321 ttggattgta ggacccataa atcagtatta gcaaagtggt cagtcatatt ccttcctcac
     4381 cagtgtctct ggtgtgccct ttctatgtct gggctgcaga aaggaacgaa cgcatcctaa
     4441 tatggggtcg tgtacgttat actatgtttc ttcatcccac ttgagcatcg ttccccatcc
     4501 tgttgcagtt aattcgaatg tatcatggtt tatttgagac cgctagagca catccctcta
     4561 tctactacta cagatagttt tattccttta tttcctttct acagcgtgtc tttttgtttt
     4621 attcgtattt tgtttcagtt ttggtttttg agacaggatt tctctgtata gccctggctc
     4681 tcttagaact cactctgcag accagggtgg cctcaaagct cagatctgcc tgcctctgcc
     4741 tctgcttccc gagtgctggg attaaaggcg tgagccacca ttacctgggc attatgccgt
     4801 tttaaataaa gtactttcct taaaattttt ataacattaa tctgtggcat attatttttg
     4861 ttttgagata aggtctcact ttgtgctttg ggctggtctc tcacccatag tgttaagatt
     4921 atgggaatat aatatgaagt tataatttta cacataagag tagcttttat aagtaatctg
     4981 cctttgcagc ttacgaaacc cttgcctata gcctctcaaa ttgaaaccct gtacacaccc
     5041 agaagctacc cagcattctt cgatatgaca tggcaaatta tttcactgaa cacactgcaa
     5101 ttccctccat cagacttggt tgctgtccat gtttgtgtgc gttttctggg cagcatcaga
     5161 tgaaagcctc agctgactga aagctgttaa taaac
//
