LOCUS       XM_039093536            2228 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to testis expressed gene 101
            (LOC681077), transcript variant X1, mRNA.
ACCESSION   XM_039093536
VERSION     XM_039093536.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2228
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2228
                     /gene="LOC681077"
                     /note="similar to testis expressed gene 101; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 4 Proteins, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:681077"
                     /db_xref="RGD:1584667"
     CDS             1278..2030
                     /gene="LOC681077"
                     /codon_start=1
                     /product="CD177 antigen-like"
                     /protein_id="XP_038949464.1"
                     /db_xref="GeneID:681077"
                     /db_xref="RGD:1584667"
                     /translation="MGACHIQYALLLSLLGFLVPCSDMLTCNKGIMVKFGIGFTKTAV
                     EWKSFENNIGAPKEICQETLLLIDVGNKSLILGSKGCSKPGEKKIKNVQVFSAGPGIV
                     AASYAHFCDTELCNNATSTRVLLDSLSLAASSDPGTLQCPVCLQFQGFCTHNSNFVFC
                     PKGTDCYTSQLTLRGGELNTTLSVDGCLVSPVKYLLKKQTSVGIFSAMEFLESETGDP
                     LSHVLVPGTLLAWMLGLWALLSLLCAGICPLS"
ORIGIN      
        1 ctgaacggtc atcttcccgg gcctaaggag ggtaaacatc tttcatggca atcagtgctg
       61 tcacttgttc cctgctccta tgtccaattt agaaggatct ccagtgacag ggcaaagggc
      121 gttccacaca aagccctctt agataccatg tgaccctggg attaggagat gacctcaaca
      181 gcaactgcca cttaccattg cctagatctc attttctgcg catgcgtacc ttctaaggca
      241 tgctgtaatt ggcttctatg gagaccaatg agatgcagca actctccagg cttatccaat
      301 gaagccttgc aatgagttct catcgaccaa tgggtcttca agacacttgc ctgcctgagg
      361 ttgccacttt gttgcgcatg tgcagaggtt acttgagagc acatctggaa gcggcttcaa
      421 agtctgagat tctggtgagg atattctgaa gccagagaga atttgccaga ggaaaaggag
      481 cagtaaggga ccacatccct gagccccgaa aaaagagcca gtgaggagga ccatgaaaga
      541 ggaggaggag gggtcctgcg tgagccttca gtctgaggat ggtggctgtg tctggacttc
      601 ttctgagttt gatgaaggga aaccaggcac tgaagtcttg gggctgaggg agaaccgagc
      661 cctagacacc ctaatctgag ggaggagggt tttactctta ttgggtttgc tccctgagtc
      721 ttcgaagagt gctcagttca ggattttatg atcctgcatg gtgctgagga ttgtactccg
      781 aggtgtgaag aaggaagctg ggtgactaga atcctgggtc caggggagta cgggctggga
      841 aaacagaatc taaatgccac attccaagga cagccaaacc agggccctca gaattcgagt
      901 tctgttggag ctgggttctg aggactgaga tgctgaggcc ttgaaaaggt tcggcttggg
      961 ctctgaagtc ctgaggttta gttaaagcag agggctcccg ggccattgtc ctgcatctag
     1021 accctgaagg aacacagtcg ctgggatcct agactcaggg gacccagagc tgagatatgc
     1081 agccagagag aacctgaggc acaggaagcc tgctggaacc tccaagtact taagacagac
     1141 tggcttccca gtcttatgtt ccctagaact gccctggcca gaaaacaagg attaacccat
     1201 ccctgtctgg ttgaattcac tcctgtagtt tatcagttcc caggtcctga tcagctcttc
     1261 ccagtctcag agaagccatg ggagcctgcc acatccagta cgccctgctc ctctctctgc
     1321 tgggcttcct cgtcccctgc tcagatatgc tgacctgtaa caagggaatc atggtgaaat
     1381 ttggcattgg cttcactaag acagcagttg agtggaaatc gtttgagaac aacataggtg
     1441 cacctaagga gatatgtcag gagacactcc tgctcataga tgtaggtaat aaatctctca
     1501 tattggggag caaaggctgt agcaaacctg gggaaaagaa gatcaaaaat gtccaggtgt
     1561 tttctgctgg acctggaata gtggctgcct cttatgccca cttctgcgac actgaactgt
     1621 gcaacaacgc taccagcacc agagtcctcc ttgactccct gtcacttgca gcctcctctg
     1681 atccgggaac cctccagtgt cctgtctgct tgcagtttca gggtttttgc acccacaatt
     1741 ccaactttgt cttctgtcct aagggcactg attgttacac tagtcaattg acactccggg
     1801 gaggtgagct caataccact ttaagcgttg acggatgcct ggtctcacct gtcaaatact
     1861 tactgaaaaa gcaaacttca gttgggatct tctctgctat ggaattcctc gagtcagaga
     1921 caggggatcc actctcacat gtacttgtcc ctggcaccct cctggcctgg atgttagggc
     1981 tctgggctct cctcagcctt ttgtgtgcag ggatttgtcc tctcagctga acccgttcct
     2041 ggccagccat actcagccct cctctgactt cgtaacccaa aggctgggca ctgtctgtcg
     2101 gcctgcactg tcgggtgccc tcatccctca cccacacatc cctgcctcct cctgtttaga
     2161 tatgggagcc gctgaactca ccctgctcca gagcagacaa ccacacatgg accacacatg
     2221 tggaaaaa
//
