LOCUS       XM_039108501            1171 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to high mobility group
            nucleosomal binding domain 1 (LOC680964), mRNA.
ACCESSION   XM_039108501
VERSION     XM_039108501.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1171
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1171
                     /gene="LOC680964"
                     /note="similar to high mobility group nucleosomal binding
                     domain 1; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 long SRA read, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments"
                     /db_xref="GeneID:680964"
                     /db_xref="RGD:1585825"
     CDS             16..306
                     /gene="LOC680964"
                     /codon_start=1
                     /product="non-histone chromosomal protein HMG-14-like"
                     /protein_id="XP_038964429.1"
                     /db_xref="GeneID:680964"
                     /db_xref="RGD:1585825"
                     /translation="MPKRKISTDGAVKAEPTSLSTRLSAKPAPAKVDGKPKKAMGKDN
                     ASDKKAQIKGKSGAKGKQAEVADQQTTDLPAENGETENQSPASGEEKEAKSD"
ORIGIN      
        1 accccgagcc tccacatgcc caagaggaag attagcacag atggagcggt gaaggcagag
       61 cctacgagcc tctccacgag gctgtcggcc aagcccgccc ctgccaaggt ggacgggaaa
      121 ccgaaaaagg ctatgggaaa ggataatgca tcagacaaaa aagcacagat taaagggaag
      181 agtggagcga agggcaaaca ggctgaagtg gctgaccagc aaactacaga tctgcctgca
      241 gaaaatggag agacggaaaa ccagagtcca gcctctgggg aagagaaaga agcgaagtcc
      301 gattaagcat ccatcacgtc tgtcagtggt ccctgcctcc cttcttgtaa aatccagagg
      361 aatattttta tcaactattt tgtaaatgca aggtttttag tagctctaga aacattttta
      421 aaaggtgagg gaatcccacc tcatcccatt tgttaagtgt aaatgtttgt ttaagaggtt
      481 aaatcatttg ctggttgttt attttttggt acaaccagaa aatagcagga tactgaatca
      541 ggagaggctg tgactgtctc aggggtcacc ataacattcc gtaaaggggg ctagttttat
      601 atccttcagt acaaagcgta ctgaatggca atttggggtc tcagtcatgc attcgtgtct
      661 agaatatttt cagttatatc tggtcccgtg tttctagtag aaccattttg taagaaagcc
      721 agtctttggt cttcgctctg tcagaactgt gatgtctgtg gtcatggcag tccattttcc
      781 taaagttgtg ataatgtgct gtgaaaaatg gagattttga gtatgttctg tgtgtgacat
      841 aaaattgtga attggtggaa ctgagcattg tgagcatttg gttgttatga gagatcttga
      901 ggaaacttgc caagtttgag gctggattat ccctggaata agttcaaaga aaaacaatat
      961 gtagctcttc atttgtatat gtgagcacaa tgtgattctt cagagttcgg gtacgtgagc
     1021 actattatgg ctccttagaa ttagggtaca tgaacactat acggctctcc agagtttggg
     1081 tacgtgtgtt aagaattgga atgtctgtgt actctactcc tcgatcaata aaatctcagt
     1141 tgtgaaagag taaaaaaaaa aactaataga a
//
