LOCUS       XM_039082300             574 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to Urinary protein 2 precursor
            (RUP-2) (LOC680406), mRNA.
ACCESSION   XM_039082300
VERSION     XM_039082300.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051343.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039082300.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..574
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="8"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..574
                     /gene="LOC680406"
                     /note="similar to Urinary protein 2 precursor (RUP-2);
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 2 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     3 samples with support for all annotated introns"
                     /db_xref="GeneID:680406"
                     /db_xref="RGD:1591793"
     CDS             77..382
                     /gene="LOC680406"
                     /codon_start=1
                     /product="urinary protein 2-like"
                     /protein_id="XP_038938228.1"
                     /db_xref="GeneID:680406"
                     /db_xref="RGD:1591793"
                     /translation="MGKHILLLPLGLSLLMSSLLALQCFRCESFDSTGLCQFGRYKCQ
                     TYPGEVCAFVIITTRDGKFVYGNQSCAECNATTVEHGSLIVSTNCFSATPFCNMVHR"
ORIGIN      
        1 tgccttcctg atattggtcc tgtgtactct gtcttcttct ctgctgattt ctggtttgaa
       61 gatcaatctc actgcaatgg gaaagcatat cttgctgctc ccactgggcc tgtctttgct
      121 catgagctcc ctgctagctt tgcagtgctt cagatgtgaa agcttcgatt ctacaggact
      181 ttgtcagttt ggaagatata aatgtcagac ttatcctggt gaggtttgtg cctttgttat
      241 aataaccact cgagatggaa aatttgtata tggaaaccag agctgtgctg agtgcaacgc
      301 tacgactgtt gagcatggaa gtcttatagt atcaacaaac tgtttctcag ccaccccttt
      361 ctgcaatatg gtacatcgct gatacttaat tgtatggaag gattttagtg ctctttattg
      421 agtcttgaca ctggagcatg ccagaaagaa taatctactg accatgtctg gacaactcac
      481 tatgatttct acatcgtgtt ttctgactac atgtatatca tatgttcttg ggtgatctgt
      541 aataaattga aagccttaca tattttaatt tgaa
//
