LOCUS       XM_039100178            1520 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to kelch domain containing 2
            (LOC679960), mRNA.
ACCESSION   XM_039100178
VERSION     XM_039100178.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051356.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039100178.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1520
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1520
                     /gene="LOC679960"
                     /note="similar to kelch domain containing 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 ESTs, 8 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments"
                     /db_xref="GeneID:679960"
                     /db_xref="RGD:1598110"
     CDS             110..1330
                     /gene="LOC679960"
                     /codon_start=1
                     /product="kelch domain-containing protein 2-like"
                     /protein_id="XP_038956106.1"
                     /db_xref="GeneID:679960"
                     /db_xref="RGD:1598110"
                     /translation="MADGNEDARAEDMPGPAFEGYEAMELACPAERSGHVAVSDGRHM
                     FVWGGYKSNQVRGLYDFYLPREELWIYNMESGRWKKINTEGDVPPSMSGSCAVCVDRV
                     LYLFGGHHSRGNTNKFYMLDSRSADRVLQWERIDCQGIPPSSKDKLGVWVYKNKLIFF
                     GGYGYIPEDKVLGTFEFDETSFRNSSHPRGWNDHVHILDTETFAWSQPITTGKAPSPR
                     AAHACATVGNKGFVFGGRYRDTRMNDLHYLNLDTWEWNELIPQGICPVGRSWHSLTAV
                     SSDHLFLFGGFTTEKQPLSDAWTYCISKNEWIQFNHSYVEKPRLWHTACASDEGEVIV
                     FGGCANNLLVHHRAAHSNEVLIFSVQPKSLVRLSLEAVICFKDMLANSWSCLPKHLLH
                     SVNQRFGSNNSSGS"
ORIGIN      
        1 gaggcgggtc gtcagcgctg gctgcgcgcc gcggtccacc gctccgcttt cctttgtctc
       61 ctgcctgcgg agccggagcg gtctcggtgc ccagcggtgc agcctcaaga tggctgatgg
      121 caacgaggat gctcgagcgg aggacatgcc aggcccggcc ttcgaaggct atgaggccat
      181 ggagctggcc tgcccggccg agcgcagcgg ccacgtcgct gtcagcgatg ggcgccacat
      241 gttcgtctgg ggcggctaca agagtaatca agtgagagga ctctatgact tctatctgcc
      301 cagagaagaa ctgtggatct acaacatgga gagtggaaga tggaaaaaga tcaacactga
      361 aggtgatgtg cccccgtcca tgtctgggag ctgcgctgtg tgcgtagaca gggtgctgta
      421 cttgtttgga ggccaccatt ccagaggcaa cacaaacaag ttctacatgc tggactcaag
      481 gtctgcagac agagtgttac agtgggaaag aattgattgc caaggaattc ctccatcatc
      541 aaaggacaaa cttggtgtct gggtatataa aaacaagtta atattttttg gaggctatgg
      601 atatatacct gaagataaag tattggggac gtttgaattt gatgaaacat cttttcggaa
      661 ttcaagtcat ccaagaggat ggaatgatca tgtccatatt ttagacactg aaacatttgc
      721 ctggagccag cccatcacca ctggcaaggc accttcacct cgtgctgccc atgcctgtgc
      781 aactgttgga aacaagggtt ttgtgtttgg tggcagatac cgagatacta gaatgaatga
      841 tctgcactat cttaatctgg acacatggga gtggaatgaa ctaattccac aaggtatatg
      901 ccctgttggc cgctcctggc actcactgac agcagtctct tcagaccatc tttttctctt
      961 cggaggattt accactgaaa agcagccact aagtgatgcc tggacttact gcatcagtaa
     1021 aaatgaatgg attcagttta atcattctta tgttgaaaaa ccaagattat ggcatacagc
     1081 ttgtgcgagc gatgagggag aagtaattgt ttttggtggt tgtgccaaca atctgctggt
     1141 ccatcatagg gctgcacaca gtaacgaagt acttatattt tcagtccaac caaaatctct
     1201 tgtacggcta agcttagaag cagtcatttg ctttaaagat atgctagcca actcgtggag
     1261 ctgccttcca aaacacttac ttcacagtgt taatcagagg tttggtagta acaacagttc
     1321 tggatcataa ggctttgtag ataatacttc tggtctactt gcatggaaaa cagccctgta
     1381 tttgtcagtg tcatcctttg tataattata tcattgttgt agtttgcagc tttctgggtt
     1441 ttatgtgcat gtgaatggcc tagagaacct atttttgtgt ctaaagttta caataaatgt
     1501 atttaacacc aaaaaaaaaa
//
