LOCUS       XM_039098098            1168 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to RIKEN cDNA 5031410I06
            (LOC679711), mRNA.
ACCESSION   XM_039098098
VERSION     XM_039098098.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051354.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039098098.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1168
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="19"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1168
                     /gene="LOC679711"
                     /note="similar to RIKEN cDNA 5031410I06; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 1 long SRA read, 1 Protein, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 4 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:679711"
                     /db_xref="RGD:1584830"
     CDS             104..766
                     /gene="LOC679711"
                     /codon_start=1
                     /product="disks large homolog 5-like"
                     /protein_id="XP_038954026.1"
                     /db_xref="GeneID:679711"
                     /db_xref="RGD:1584830"
                     /translation="MFSRLRKRFGRGNVDCGETKVKESSLSSQSNDGQRQRFWGMWNA
                     GRETSPPETALSEKQAKKEKERLIKELQLITEERNDLRDRLRFLTERSMKNRPHFRPN
                     PYYEDLERMEEAVMSILHNLEMENTEIHENNHKLKKEITFSRNLLSQLLMENTCRKKL
                     VPLKQESKEVHLDCALNQKYLVDFNKKDKDQQRPDPPSSGLRKCKRAGIGHTPVREHA
                     EE"
ORIGIN      
        1 tctcctagag agttctggca tcctctgtga tgtcaccagt gttgtagtga caaccagtac
       61 cctagtttct ctcagtctga gtctggcagt tacaagctaa gacatgtttt cccgtcttcg
      121 caagcgtttt gggaggggga acgtcgattg tggagagact aaagtgaagg aatctagcct
      181 ttcgtctcaa agtaacgatg gacaaagaca gcgtttctgg ggaatgtgga atgctgggag
      241 agaaacatca ccccctgaaa ctgccctaag tgagaagcag gccaagaagg aaaaggagag
      301 gctgattaaa gagctgcagc tcattaccga ggagagaaat gacctgagag atcgcctgag
      361 gtttctgaca gagagatcta tgaaaaacag gccacacttc aggccaaatc catattatga
      421 agacctggag agaatggagg aggcggtcat gtcaattctg cacaacttag agatggagaa
      481 cactgagatc catgagaaca accataagct gaagaaggag attaccttct ctagaaacct
      541 gctcagccag ctcctgatgg agaacacatg taggaagaag ttggtcccac tgaagcagga
      601 gagcaaggag gtacatcttg attgtgcact gaaccagaaa tatttggttg acttcaacaa
      661 gaaagataaa gaccagcaac gtccagaccc accatcatca ggtctcagaa agtgcaagag
      721 agctggaatt ggacacacac cagtaagaga gcatgctgag gaataagttg ctttctcagg
      781 agtccctgat gacaaacatc ctgaacgaaa acaccacttg agagacaact tgggggaccg
      841 cctttcatta tgtgtgctag aggagaaaca gcaatacatc tgtgcttcta aatgtttgtt
      901 aagaatatgc tgtttagaaa tatttttgtt atgattttaa ttgaagtttt ctttttgttg
      961 tttcatattt atatgttctt gttactattt ttcactttca aatattttta catattttta
     1021 tttattcatt ttaatcctgt tttgttgtaa aaatgtattt gttatgaata aaaattgaat
     1081 tctatctctt gactcttaag accatcattc ttactcaagg gttctgtccc ctcctgtggg
     1141 cttagaactg acagctatag atggatct
//
