LOCUS       XM_039108863            1283 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to immunoreceptor Ly49si1
            (LOC502907), mRNA.
ACCESSION   XM_039108863
VERSION     XM_039108863.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1283
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1283
                     /gene="LOC502907"
                     /note="similar to immunoreceptor Ly49si1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 51 Proteins, and 95% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:502907"
                     /db_xref="RGD:1584856"
     CDS             195..1001
                     /gene="LOC502907"
                     /codon_start=1
                     /product="T-cell surface glycoprotein YE1/48-like"
                     /protein_id="XP_038964791.1"
                     /db_xref="GeneID:502907"
                     /db_xref="RGD:1584856"
                     /translation="MSEQEVSYSNVRFQKCSGLQNQVRPEETQRARAAGHRERSVPWQ
                     IAVVALVILCSLRLVAVAMFVTKIFQYTHEKRELPEETLSLINNFSTMQSNIYLKEEM
                     LRNMSINCSQGNDLLQSLNREQTRWYSETKTVLPSSQHTGQNFEIYWFCYGIKCYYFI
                     LDTKAWNGCKQTCQDSSFFLLKIDDEDELKFLRLQVLSYQYWIGLSYNKTEKEWSWID
                     NGQSELSLNLKKYNVKDGDCMFLSKTRLENAMCSSPYPCICQKRLDKFPH"
ORIGIN      
        1 ctctaatgga aataagggtc attccatgtc agggtgtttg gatcattaag taaatcaatc
       61 agaccctacc ctttcttagt cctctgtatc atcagatcta ggtactttcc taaaatgtgt
      121 atttcaacat tttttctaga aatcattgaa ggcccaactt taactgaaaa caaacttcat
      181 acatcactca aaaaatgagt gagcaggagg tgtcttactc aaatgtgaga tttcaaaaat
      241 gttcaggttt gcagaaccaa gtgaggcctg aggagactca aagggccaga gcagctggcc
      301 acagagagag atcagtcccc tggcagatcg ctgtggtagc tcttgtaatc ctctgttccc
      361 ttcggctggt agctgttgca atgttcgtga caaagatttt tcagtatact catgaaaaac
      421 gtgaactgcc ggaggaaact ctaagcctta tcaataactt cagcaccatg caaagtaaca
      481 tctatttaaa ggaagaaatg ctaagaaata tgtctataaa ctgtagtcaa ggcaatgatc
      541 tcctgcaatc tctaaacaga gaacagacaa gatggtacag tgaaactaag actgttttac
      601 cttcctctca gcacacaggc caaaattttg aaatatactg gttctgctat ggtataaaat
      661 gttattattt catcctggac acaaaagcat ggaatggatg taaacaaacc tgccaggatt
      721 ccagcttttt ccttctgaag atagatgatg aggatgaact gaagttcctt cggctccagg
      781 ttctttcata ccagtactgg attggattgt catataataa aacagaaaag gaatggtcat
      841 ggattgacaa tggccaatct gaattatcct tgaacctaaa gaaatacaat gtaaaggatg
      901 gagactgtat gttcttgtct aaaacaagac tagaaaatgc tatgtgctcc agcccctacc
      961 catgtatttg tcagaagaga ctggataagt tccctcattg actctccaac aagagttaaa
     1021 ggatttactc tgctgtgcaa acagagagat gagctggaag agtgtgggaa tgttctctgg
     1081 aatctgatat ggcagagcag aggcttcttc catcctggtg aagacaggac acattttctc
     1141 tggtgcacgg acatggtttg cttcaaagtc tccaggactc tgcactttct gatttcttaa
     1201 actcttatac aattaaatca aatcccaata accaacctgt atatttcatt atgattagaa
     1261 taaatcctgt tacttgaaat tgg
//
