LOCUS       XM_039108938            1592 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus similar to ribosomal protein S8
            (LOC500371), mRNA.
ACCESSION   XM_039108938
VERSION     XM_039108938.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1592
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1592
                     /gene="LOC500371"
                     /note="similar to ribosomal protein S8; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 11 ESTs, 1 long SRA read, 26 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 12 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:500371"
                     /db_xref="RGD:1584871"
     CDS             922..1551
                     /gene="LOC500371"
                     /codon_start=1
                     /product="40S ribosomal protein S8-like"
                     /protein_id="XP_038964866.1"
                     /db_xref="GeneID:500371"
                     /db_xref="RGD:1584871"
                     /translation="MGISRDNWHRCCKTGVREKPYHKKRKYELGRRPPTLSKIGPRCI
                     HTVRVRGGNKKYPAPRLDVGNFSWGSECCTRKTRIIDVVYNASNNELVRTKTLVKNCI
                     VLIDSTWYRQWYESHYALPLGRKKRVKLTPEEEEILNKKGSKKIQKKYDERKKNAKIS
                     SLLEEQFQQGKLLACIASRPGQCDRADGYVLEGKELEFYLRKIKAGKGK"
ORIGIN      
        1 tagaccaaga tggccttgaa cttacagaga tccagctgct tatgcctcct agttgctggg
       61 attaaaaatg tgtgccatca tacctggcct taagtatgat tcaatacatt gaaaactata
      121 aagaatccat caaaagacca ttagtattga tgaaaatatc cagtaaagta gcaagataca
      181 aaaaattcca catatcaaaa tcattgcttt cttttggtct tttctcatcc cctcttcttt
      241 ctggtttttt ttccccctga aataggatct ctagcatagg ttgtagctac agataacgtt
      301 tctgatcttc cagcctttat cccccaagag ctaggattac agaggtgcgt aacttgttta
      361 tgaagtgttg gatactgaat tcagggcctc ctatacgtta tgcaagcact cataccaact
      421 acaatcctag ttatattagt tacattttta tgcaccaatt atttaattgc tgagaaattt
      481 aataaacccg ttcataatag ctacaaaaat taaatttcaa agaataaatt tcaggaaact
      541 gaaagacctc tacgatgcaa attataccct gatgaaagga attgaaggca catacataca
      601 cacacacaca cacacacaca cacacacaca caaacacaca cacacaaatg ggaagaccta
      661 atgagattat agtgtcaata caacaatgct ttatagaact agaaaaacta attctaaatt
      721 tgctaaagca atattgaatt gtaaaagaat aggagagtgg ctggggagat ggctcagtgg
      781 ataagcgttt actactgttg acttttgttg acttgtacag atcttgtgtt tgggacctgg
      841 atatgaaagc ctcagagaag tggcagacta cagcctaatg ctttaaacaa ccctatttca
      901 gtttcaagac agcgccaagc gatgggcatc tctcgggaca actggcacag gtgctgcaag
      961 acgggggtaa gagaaaaacc ctaccacaag aagaggaagt atgagctggg acgccggccg
     1021 ccaacactaa gtaagattgg ccctcgctgc atacacacag tccgagttcg aggaggtaat
     1081 aagaagtatc ctgctccgag attggatgtg gggaactttt cctggggctc tgagtgttgt
     1141 actcgcaaaa caaggatcat tgatgttgtc tacaatgcat ccaataacga gctcgtccgc
     1201 accaagaccc tggtgaagaa ctgcattgtg cttattgaca gcacatggta ccgacagtgg
     1261 tacgagtccc actatgcact gcccctgggc cgcaagaaga gggtgaagct gactcctgag
     1321 gaggaagaga ttttaaacaa aaaaggatca aagaaaattc aaaagaaata tgatgaaagg
     1381 aaaaagaatg ccaaaatcag cagtcttctg gaggagcagt tccagcaggg caagcttctc
     1441 gcctgtattg cctcaagacc aggccagtgt gacagagcag atggctatgt gctcgaaggc
     1501 aaggagctgg agttctatct gcggaagatc aaagccggga aaggcaaata aactgtcata
     1561 actcgtgtaa taaaggtgtt tgctgttctg ta
//
